SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0025202790	0.24210	0.0025202790	6499	15.02312	39.90520	60.09055	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0010136550	0.10790	0.0010136550	22292	51.53028	83.35981	16.63849	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0035026570	0.59640	0.0035026570	2701	6.24364	21.04889	78.94521	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0011475390	0.61540	0.0011475390	20113	46.49330	79.39581	20.60225	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	-0.0007375660	0.22630	0.0007375660	27045	62.51734	90.32700	9.67175	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0001297910	0.64020	0.0001297910	40141	92.79011	99.66152	0.33826	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0001144710	0.40350	0.0001144710	40493	93.60379	99.73390	0.26590	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0000776070	0.05090	0.0000776070	41377	95.64725	99.87701	0.12286	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0006378630	0.32230	0.0006378630	29008	67.05502	92.60101	7.39792	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0026833550	0.57950	0.0026833550	5651	13.06288	36.19205	63.80343	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	-0.0021468830	0.56860	0.0021468830	8918	20.61489	49.37683	50.61956	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0001214470	0.40620	0.0001214470	40327	93.22006	99.70088	0.29891	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0013049550	0.09390	0.0013049550	17858	41.28063	74.75101	25.24679	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0025554880	0.20450	0.0025554880	6298	14.55848	39.04577	60.94993	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	-0.0021798620	0.25080	0.0021798620	8669	20.03930	48.46867	51.52766	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik