SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18530	-0.0007269630	0.24220	0.0007269630	28743	66.34735	92.06753	7.93136	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05450	0.0001032800	0.11030	0.0001032800	41161	95.01177	99.82934	0.17050	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.54790	-0.0008573120	0.60050	0.0008573120	26412	60.96671	89.23440	10.76428	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.62090	-0.0004606770	0.61760	0.0004606770	33730	77.85882	96.61580	3.38349	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20450	-0.0000378130	0.22390	0.0000378130	42549	98.21569	99.97812	0.02182	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59390	0.0005161940	0.64020	0.0005161940	32696	75.47205	95.83897	4.16023	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47370	0.0030256410	0.40640	0.0030256410	5136	11.85541	33.34602	66.64932	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01510	-0.0010720680	0.05020	0.0010720680	22974	53.03079	84.14082	15.85753	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25930	-0.0029314240	0.32610	0.0029314240	5600	12.92646	35.47158	64.52391	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54930	0.0007419240	0.58090	0.0007419240	28438	65.64332	91.72298	8.27588	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55650	0.0023238550	0.56490	0.0023238550	9195	21.22478	49.88172	50.11470	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36980	0.0015450340	0.40770	0.0015450340	16466	38.00840	71.15003	28.84759	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06160	0.0004185350	0.09360	0.0004185350	34578	79.81626	97.18833	2.81103	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12070	-0.0003627620	0.20540	0.0003627620	35715	82.44079	97.87149	2.12795	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24230	0.0000672750	0.24990	0.0000672750	41884	96.68067	99.92416	0.07574	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik