SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0030874510	0.24210	0.0030874510	5706	13.19001	35.92200	64.07350	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0005722380	0.10790	0.0005722380	32039	74.06149	95.40043	4.59874	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0000812930	0.59640	0.0000812930	41604	96.17198	99.90184	0.09805	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0010934450	0.61540	0.0010934450	23514	54.35506	85.16242	14.83598	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0020873690	0.22630	0.0020873690	12035	27.82016	59.23199	40.76497	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0015634300	0.64020	0.0015634300	17369	40.15025	73.34609	26.65163	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0023333270	0.40350	0.0023333270	10047	23.22469	52.84625	47.15035	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0003632550	0.05090	0.0003632550	36015	83.25243	98.10231	1.89716	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0018304970	0.32230	0.0018304970	14495	33.50670	66.24711	33.75022	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0008395180	0.57950	0.0008395180	27464	63.48590	90.70498	9.29379	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0025809700	0.56860	0.0025809700	8360	19.32501	46.81614	53.18010	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0001931790	0.40620	0.0001931790	39363	90.99168	99.45602	0.54370	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0007078010	0.09390	0.0007078010	29657	68.55525	93.17709	6.82188	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0029879040	0.20450	0.0029879040	6159	14.23717	37.92643	62.06922	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	-0.0001022360	0.25080	0.0001022360	41183	95.19880	99.84550	0.15435	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik