SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0018814540	0.24210	0.0018814540	11825	27.33472	58.52508	41.47185	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0000591830	0.10790	0.0000591830	41954	96.98104	99.93679	0.06312	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0011881130	0.59640	0.0011881130	20243	46.79380	79.23173	20.76634	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0030130780	0.61540	0.0030130780	4555	10.52936	30.47838	69.51672	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0047953610	0.22630	0.0047953610	886	2.04808	8.49257	91.49962	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0020229090	0.64020	0.0020229090	10526	24.33195	54.39728	45.59943	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0017609400	0.40350	0.0017609400	13047	30.15950	62.15246	37.84468	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0001598330	0.05090	0.0001598330	39698	91.76607	99.53141	0.46833	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0009756310	0.32230	0.0009756310	23657	54.68562	85.24211	14.75630	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0019985260	0.57950	0.0019985260	10733	24.81045	55.07476	44.92199	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0045350160	0.56860	0.0045350160	1132	2.61674	10.35978	89.63284	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0006379310	0.40620	0.0006379310	29640	68.51595	93.05574	6.94322	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0003608820	0.09390	0.0003608820	35388	81.80305	97.70482	2.29459	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0001324840	0.20450	0.0001324840	40324	93.21313	99.68080	0.31899	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0004781570	0.25080	0.0004781570	32900	76.05178	96.01085	3.98837	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik