SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0024108450	0.24210	0.0024108450	7879	18.21313	44.64386	55.35227	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0011551840	0.10790	0.0011551840	21125	48.83264	80.84697	19.15117	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0015057430	0.59640	0.0015057430	16344	37.78086	70.68762	29.30996	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0021607270	0.61540	0.0021607270	9805	22.66528	51.68938	48.30716	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0036727300	0.22630	0.0036727300	2548	5.88997	19.49090	80.50320	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0022732800	0.64020	0.0022732800	8870	20.50393	48.36393	51.63242	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0002270160	0.40350	0.0002270160	38338	88.62228	99.12058	0.87905	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0007374480	0.05090	0.0007374480	28118	64.99769	91.39097	8.60785	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0018496970	0.32230	0.0018496970	12546	29.00139	60.50089	39.49614	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0022106140	0.57950	0.0022106140	9381	21.68516	50.20258	49.79387	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0029185960	0.56860	0.0029185960	5092	11.77069	32.78395	67.21137	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0005854340	0.40620	0.0005854340	30876	71.37309	94.31277	5.68629	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0014526090	0.09390	0.0014526090	17007	39.31345	72.26121	27.73646	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0016836610	0.20450	0.0016836610	14272	32.99122	65.39444	34.60286	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0010629710	0.25080	0.0010629710	22542	52.10818	83.36939	16.62890	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik