SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0007690940	0.24210	0.0007690940	26023	60.15488	88.90049	11.09818	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0008260530	0.10790	0.0008260530	24977	57.73694	87.44942	12.54915	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0006446350	0.59640	0.0006446350	28487	65.85067	91.93005	8.06882	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0035166920	0.61540	0.0035166920	2373	5.48544	18.58291	81.41097	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0032711030	0.22630	0.0032711030	3007	6.95099	22.32529	77.66901	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0009488430	0.64020	0.0009488430	22852	52.82478	84.16942	15.82893	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0005111160	0.40350	0.0005111160	31354	72.47804	94.81058	5.18853	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0003237330	0.05090	0.0003237330	35538	82.14979	97.85063	2.14881	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0012057090	0.32230	0.0012057090	18752	43.34720	76.51114	23.48676	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0048771000	0.57950	0.0048771000	588	1.35922	6.02853	93.96299	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0006518130	0.56860	0.0006518130	28325	65.47619	91.74734	8.25152	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0018330160	0.40620	0.0018330160	11246	25.99630	56.93017	43.06664	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0001243760	0.09390	0.0001243760	40162	92.83865	99.65979	0.34000	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0005220100	0.20450	0.0005220100	31112	71.91863	94.59293	5.40616	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0024237410	0.25080	0.0024237410	6631	15.32825	40.02320	59.97258	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik