SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18530	-0.0030391240	0.24220	0.0030391240	5266	12.15549	33.95356	66.04184	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05450	-0.0006902890	0.11030	0.0006902890	29441	67.95854	92.93435	7.06461	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.54790	-0.0055102720	0.60050	0.0055102720	634	1.46346	6.64335	93.34830	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.62090	0.0006244160	0.61760	0.0006244160	30673	70.80236	94.16285	5.83620	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20450	-0.0010308600	0.22390	0.0010308600	23798	54.93283	85.62515	14.37329	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59390	-0.0001196130	0.64020	0.0001196130	40813	94.20849	99.76676	0.23306	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47370	-0.0006944430	0.40640	0.0006944430	29376	67.80850	92.86618	7.13277	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01510	0.0002392110	0.05020	0.0002392110	38257	88.30848	99.07459	0.92505	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25930	-0.0015521540	0.32610	0.0015521540	16817	38.81861	72.10124	27.89641	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54930	0.0011060980	0.58090	0.0011060980	22682	52.35677	83.81804	16.18029	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55650	0.0036363240	0.56490	0.0036363240	3241	7.48119	23.78452	76.20997	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36980	-0.0006641550	0.40770	0.0006641550	29945	69.12192	93.45112	6.54787	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06160	0.0000640130	0.09360	0.0000640130	42024	97.00383	99.93635	0.06355	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12070	-0.0006532810	0.20540	0.0006532810	30153	69.60205	93.65887	6.34014	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24230	-0.0000735140	0.24990	0.0000735140	41818	96.52832	99.91487	0.08502	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik