SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0018161190	0.24210	0.0018161190	10841	25.06010	55.70408	44.29265	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0000267440	0.10790	0.0000267440	42596	98.46509	99.98454	0.01541	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0033531620	0.59640	0.0033531620	2491	5.75821	19.31479	80.67918	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0009466390	0.61540	0.0009466390	22387	51.74988	83.48012	16.51818	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0036083680	0.22630	0.0036083680	1937	4.47758	15.84842	84.14509	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0031409190	0.64020	0.0031409190	3084	7.12899	22.77018	77.22418	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0028308370	0.40350	0.0028308370	4209	9.72954	28.79418	71.20073	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0002491150	0.05090	0.0002491150	36962	85.44152	98.59011	1.40944	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0006487210	0.32230	0.0006487210	27934	64.57235	91.39810	8.60073	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0009195210	0.57950	0.0009195210	22851	52.82247	84.25819	15.74016	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0028681090	0.56860	0.0028681090	4054	9.37124	28.00014	71.99471	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0008357780	0.40620	0.0008357780	24338	56.25982	86.60416	13.39434	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0015837200	0.09390	0.0015837200	13265	30.66343	63.09885	36.89830	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0006146200	0.20450	0.0006146200	28682	66.30143	92.24764	7.75126	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0009486250	0.25080	0.0009486250	22354	51.67360	83.42390	16.57440	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik