SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	0.0000401250	0.24210	0.0000401250	42319	97.82478	99.96917	0.03076	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0009828230	0.10790	0.0009828230	22822	52.75543	83.96974	16.02860	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0045886200	0.59640	0.0045886200	919	2.12436	8.81178	91.18046	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0009321120	0.61540	0.0009321120	23691	54.76422	85.37794	14.62048	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0018816100	0.22630	0.0018816100	11114	25.69117	56.53962	43.45720	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0017968480	0.64020	0.0017968480	11929	27.57513	59.07516	40.92180	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0002251770	0.40350	0.0002251770	38037	87.92649	99.01150	0.98812	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0002082460	0.05090	0.0002082460	38454	88.89043	99.16423	0.83542	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0022457620	0.32230	0.0022457620	8214	18.98752	46.45728	53.53892	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0010813880	0.57950	0.0010813880	21172	48.94129	81.08895	18.90922	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0001154200	0.56860	0.0001154200	40540	93.71244	99.73567	0.26414	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0007431070	0.40620	0.0007431070	27081	62.60055	90.17898	9.81976	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0001214750	0.09390	0.0001214750	40410	93.41193	99.70960	0.29020	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0005855970	0.20450	0.0005855970	30172	69.74572	93.64864	6.35036	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	-0.0003839520	0.25080	0.0003839520	34514	79.78271	97.20398	2.79537	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik