SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0006848260	0.24210	0.0006848260	29207	67.51503	92.65414	7.34479	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0009565450	0.10790	0.0009565450	24538	56.72215	86.70012	13.29838	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0014234920	0.59640	0.0014234920	17781	41.10264	74.30282	25.69496	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	0.0014049040	0.61540	0.0014049040	17996	41.59963	74.77732	25.22049	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0023384610	0.22620	0.0023384610	8870	20.50393	48.71931	51.27704	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0025384920	0.64020	0.0025384920	7551	17.45492	43.70568	56.29036	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0011513740	0.40350	0.0011513740	21405	49.47989	81.55111	18.44709	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0002254610	0.05090	0.0002254610	38392	88.74711	99.14793	0.85172	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0010298940	0.32230	0.0010298940	23339	53.95053	84.84114	15.15725	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0002187430	0.57950	0.0002187430	38524	89.05224	99.19366	0.80599	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	-0.0002025030	0.56860	0.0002025030	38883	89.88211	99.31164	0.68804	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0015432110	0.40620	0.0015432110	16339	37.76930	70.96681	29.03079	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0001695650	0.09390	0.0001695650	39589	91.51410	99.51631	0.48342	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0001832230	0.20440	0.0001832230	39271	90.77901	99.42879	0.57093	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0007358020	0.25080	0.0007358020	28273	65.35599	91.62005	8.37880	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik