SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0015322490	0.24210	0.0015322490	15842	36.62043	69.78038	30.21716	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0005051180	0.10790	0.0005051180	32426	74.95608	95.70783	4.29136	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0009067560	0.59640	0.0009067560	24889	57.53352	87.26128	12.73726	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	0.0026934520	0.61540	0.0026934520	6277	14.50994	38.59391	61.40177	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0023928030	0.22630	0.0023928030	8037	18.57836	45.75807	54.23809	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0026475220	0.64020	0.0026475220	6524	15.08091	39.65294	60.34281	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0000178360	0.40350	0.0000178360	42824	98.99214	99.99378	0.00619	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0000441770	0.05090	0.0000441770	42277	97.72769	99.96645	0.03348	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0004461300	0.32230	0.0004461300	33576	77.61442	96.58509	3.41419	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0018977850	0.57950	0.0018977850	11920	27.55432	59.04087	40.95608	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	-0.0011585770	0.56860	0.0011585770	20872	48.24780	80.61046	19.38768	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0011417450	0.40620	0.0011417450	21156	48.90430	81.13491	18.86326	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0000430310	0.09390	0.0000430310	42299	97.77855	99.96799	0.03194	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0000724750	0.20450	0.0000724750	41637	96.24827	99.90622	0.09367	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0003070420	0.25080	0.0003070420	36466	84.29496	98.32765	1.67186	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik