SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0023973150	0.24210	0.0023973150	9897	22.87795	52.29377	47.70282	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0014861800	0.10790	0.0014861800	18608	43.01433	75.87520	24.12269	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0068458420	0.59640	0.0068458420	318	0.73509	3.70983	96.28043	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	0.0001716060	0.61540	0.0001716060	39900	92.23301	99.59032	0.40943	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0015174700	0.22630	0.0015174700	18210	42.09431	75.02536	24.97248	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0023706710	0.64020	0.0023706710	10088	23.31946	52.94166	47.05497	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0012010210	0.40350	0.0012010210	22484	51.97411	83.26439	16.73390	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0005243440	0.05090	0.0005243440	33318	77.01803	96.32925	3.67001	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0014327720	0.32230	0.0014327720	19270	44.54461	77.24964	22.74833	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0013938540	0.57950	0.0013938540	19771	45.70273	78.25649	21.74153	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0020627280	0.56860	0.0020627280	12596	29.11697	60.83318	39.16388	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0009485570	0.40620	0.0009485570	26236	60.64725	88.96644	11.03221	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0006773040	0.09390	0.0006773040	30662	70.87841	94.05572	5.94332	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0008019250	0.20450	0.0008019250	28509	65.90153	91.79526	8.20360	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0002978100	0.25080	0.0002978100	37555	86.81230	98.80603	1.19355	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik