SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	0.0004136410	0.24210	0.0004136410	34549	79.86362	97.19750	2.80185	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0002808160	0.10790	0.0002808160	37290	86.19972	98.69043	1.30913	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0003358670	0.59640	0.0003358670	36134	83.52751	98.13060	1.86888	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0043530640	0.61540	0.0043530640	1567	3.62228	13.92499	86.06817	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0003324530	0.22630	0.0003324530	36210	83.70319	98.17045	1.82903	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0011849520	0.64020	0.0011849520	20757	47.98197	80.38553	19.61261	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0030654410	0.40350	0.0030654410	4824	11.15118	32.26806	67.72713	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0006847210	0.05090	0.0006847210	29134	67.34628	92.54213	7.45680	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0011697560	0.32230	0.0011697560	20957	48.44429	80.75524	19.24293	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0008272160	0.57950	0.0008272160	26528	61.32224	89.45144	10.54726	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0033990040	0.56860	0.0033990040	3612	8.34951	26.13683	73.85784	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0000722480	0.40620	0.0000722480	41694	96.38003	99.91046	0.08943	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0001725850	0.09390	0.0001725850	39580	91.49330	99.50383	0.49590	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0004342440	0.20450	0.0004342440	34100	78.82571	96.89855	3.10077	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	-0.0024562450	0.25080	0.0024562450	7832	18.10448	45.19722	54.79893	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik