SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0010115060	0.24210	0.0010115060	23440	54.18400	84.78714	15.21124	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0005583140	0.10790	0.0005583140	31514	72.84790	94.83110	5.16801	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0029468030	0.59640	0.0029468030	5037	11.64355	32.61530	67.37999	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0034775640	0.61540	0.0034775640	3141	7.26075	22.94591	77.04853	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0036931170	0.22630	0.0036931170	2576	5.95469	19.71125	80.28285	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0000224150	0.64020	0.0000224150	42771	98.86963	99.99153	0.00843	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0022361830	0.40350	0.0022361830	9199	21.26445	49.60671	50.38971	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0000866240	0.05090	0.0000866240	41384	95.66343	99.87097	0.12889	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0004645220	0.32230	0.0004645220	33423	77.26075	96.39174	3.60752	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0036866470	0.57950	0.0036866470	2596	6.00092	19.82918	80.16493	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0026859930	0.56860	0.0026859930	6281	14.51919	38.20267	61.79304	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0004189870	0.40620	0.0004189870	34329	79.35506	97.03088	2.96845	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0000106570	0.09390	0.0000106570	43025	99.45677	99.99808	0.00190	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0000327010	0.20450	0.0000327010	42548	98.35414	99.98179	0.01816	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0008880580	0.25080	0.0008880580	25481	58.90199	87.88455	12.11403	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik