SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	0.0008959990	0.24210	0.0008959990	25821	59.68793	88.63990	11.35874	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0005363030	0.10790	0.0005363030	32277	74.61165	95.63266	4.36652	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	0.0006004220	0.59640	0.0006004220	31078	71.84004	94.59596	5.40313	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	0.0004825890	0.61540	0.0004825890	33274	76.91632	96.40436	3.59491	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0005107460	0.22630	0.0005107460	32736	75.67268	95.99805	4.00118	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0037952230	0.64020	0.0037952230	2852	6.59270	21.84032	78.15391	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0014771120	0.40350	0.0014771120	17449	40.33518	73.68542	26.31234	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0002132210	0.05090	0.0002132210	38708	89.47758	99.26782	0.73186	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0006569120	0.32230	0.0006569120	30013	69.37818	93.57770	6.42131	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0010102020	0.57950	0.0010102020	23970	55.40915	85.96110	14.03736	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0003023990	0.56860	0.0003023990	36868	85.22423	98.55045	1.44909	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0006321820	0.40620	0.0006321820	30479	70.45539	94.03495	5.96408	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0006482380	0.09390	0.0006482380	30193	69.79427	93.75626	6.24275	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0028061420	0.20450	0.0028061420	6375	14.73648	39.19420	60.80153	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0006154530	0.25080	0.0006154530	30792	71.17892	94.33181	5.66726	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik