SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0009533370	0.24210	0.0009533370	26286	60.76283	89.16164	10.83703	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0000548630	0.10790	0.0000548630	42154	97.44337	99.95714	0.04279	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0035477160	0.59640	0.0035477160	4433	10.24734	29.97874	70.01630	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0037222810	0.61540	0.0037222810	3920	9.06149	27.37426	72.62053	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0047296020	0.22630	0.0047296020	1717	3.96902	14.59348	85.39991	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0024438530	0.64020	0.0024438530	10000	23.11604	52.75087	47.24572	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0032671230	0.40350	0.0032671230	5478	12.66297	34.95242	65.04301	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0003986400	0.05090	0.0003986400	35630	82.36246	97.90067	2.09878	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0036618540	0.32230	0.0036618540	4074	9.41748	28.16928	71.82560	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0021107400	0.57950	0.0021107400	12553	29.01757	60.84791	39.14914	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0047388380	0.56860	0.0047388380	1703	3.93666	14.50079	85.49258	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0025962020	0.40620	0.0025962020	8956	20.70273	49.07147	50.92490	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	-0.0003073920	0.09390	0.0003073920	37335	86.30374	98.74356	1.25601	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0007671610	0.20450	0.0007671610	29248	67.60980	92.71699	7.28194	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0002655780	0.25080	0.0002655780	38113	88.10217	99.05499	0.94464	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik