SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0004338500	0.24210	0.0004338500	33340	77.06889	96.35797	3.64129	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0004546070	0.10790	0.0004546070	32877	75.99861	96.00567	3.99356	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0024081020	0.59640	0.0024081020	6985	16.14656	41.17725	58.81863	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0033611750	0.61540	0.0033611750	2892	6.68516	21.38530	78.60895	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0031618920	0.22630	0.0031618920	3493	8.07443	24.73939	75.25519	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0025040270	0.64020	0.0025040270	6424	14.84975	38.81765	61.17806	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0011520820	0.40350	0.0011520820	20037	46.31761	78.76626	21.23177	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0012241930	0.05090	0.0012241930	18946	43.79565	76.54829	23.44961	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0014994290	0.32230	0.0014994290	15134	34.98382	67.69380	32.30363	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	-0.0000997640	0.57950	0.0000997640	40896	94.53537	99.80127	0.19856	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0029397460	0.56860	0.0029397460	4333	10.01618	29.12207	70.87290	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0049426400	0.40620	0.0049426400	553	1.27832	5.57696	94.41458	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0003531240	0.09390	0.0003531240	35178	81.31761	97.59598	2.40341	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0009357650	0.20450	0.0009357650	23551	54.44059	85.03142	14.96698	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0003093290	0.25080	0.0003093290	36139	83.53907	98.14113	1.85834	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik