SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0028509910	0.24210	0.0028509910	5358	12.38558	34.56053	65.43485	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0000453250	0.10790	0.0000453250	42261	97.69071	99.96327	0.03666	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0010999730	0.59640	0.0010999730	21626	49.99075	81.93366	18.06456	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0028612600	0.61540	0.0028612600	5313	12.28155	34.35201	65.64335	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0057052150	0.22630	0.0057052150	405	0.93620	4.57407	95.41667	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0003875700	0.64020	0.0003875700	34787	80.41378	97.35577	2.64360	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0002037990	0.40350	0.0002037990	38742	89.55617	99.25371	0.74596	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0002882370	0.05090	0.0002882370	36931	85.36986	98.52893	1.47060	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0009932160	0.32230	0.0009932160	23245	53.73324	84.68313	15.31526	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0011669010	0.57950	0.0011669010	20567	47.54276	79.98635	20.01176	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0019772470	0.56860	0.0019772470	10985	25.39297	56.11647	43.88032	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0024593360	0.40620	0.0024593360	7376	17.05039	43.20610	56.78991	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0016511930	0.09390	0.0016511930	14218	32.86639	65.60126	34.39606	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0007079370	0.20450	0.0007079370	28254	65.31207	91.56776	8.43109	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0039523250	0.25080	0.0039523250	2014	4.65557	16.62236	83.37123	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik