SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	0.0004927210	0.24210	0.0004927210	33934	78.44198	96.76602	3.23327	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0008026750	0.10790	0.0008026750	28436	65.73278	91.72029	8.27857	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0038776200	0.59640	0.0038776200	3261	7.53814	23.56456	76.42991	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0004708250	0.61540	0.0004708250	34338	79.37587	97.04391	2.95542	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0001976550	0.22630	0.0001976550	39440	91.16967	99.46646	0.53326	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0037602560	0.64020	0.0037602560	3586	8.28941	25.33324	74.66140	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0005514120	0.40350	0.0005514120	32858	75.95469	95.96650	4.03271	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0008748440	0.05090	0.0008748440	27206	62.88951	90.25073	9.74802	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	0.0022237890	0.32230	0.0022237890	11354	26.24595	56.97646	43.02037	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0008864590	0.57950	0.0008864590	27021	62.46186	90.01846	9.98027	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	-0.0028155690	0.56860	0.0028155690	7373	17.04346	42.78881	57.20717	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0020589580	0.40620	0.0020589580	12743	29.45677	61.21340	38.78366	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0004156050	0.09390	0.0004156050	35334	81.67822	97.67254	2.32687	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	0.0005204260	0.20450	0.0005204260	33415	77.24226	96.39150	3.60776	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0032908360	0.25080	0.0032908360	5144	11.89089	33.13449	66.86082	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik