SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0009269480	0.24210	0.0009269480	26454	61.15118	89.49505	10.50364	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	-0.0015868470	0.10790	0.0015868470	17529	40.52011	73.92125	26.07651	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0007557530	0.59640	0.0007557530	29230	67.56819	92.77786	7.22107	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	0.0017668280	0.61540	0.0017668280	15564	35.97781	69.29074	30.70678	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0007388840	0.22630	0.0007388840	29507	68.20851	93.06920	6.92976	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	-0.0004426260	0.64020	0.0004426260	34703	80.21960	97.37212	2.62726	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	-0.0051216540	0.40350	0.0051216540	1342	3.10217	12.21838	87.77442	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	0.0008904790	0.05090	0.0008904790	27048	62.52427	90.25404	9.74470	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0027283830	0.32230	0.0027283830	8035	18.57374	45.91633	54.07983	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0034308230	0.57950	0.0034308230	4725	10.92233	31.71281	68.28237	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	-0.0010853020	0.56860	0.0010853020	24071	55.64263	86.12897	13.86951	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	-0.0050946200	0.40620	0.0050946200	1367	3.15996	12.39793	87.59490	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0000200540	0.09390	0.0000200540	42850	99.05224	99.99435	0.00562	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0001786650	0.20450	0.0001786650	39724	91.82617	99.56072	0.43902	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	-0.0006530220	0.25080	0.0006530220	31003	71.66667	94.53050	5.46858	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik