SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43860	0.0006510960	0.44080	0.0006510960	21987	56.09358	86.07301	13.92528	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06250	-0.0005766280	0.08500	0.0005766280	23649	60.33370	88.76295	11.23553	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75660	0.0000129170	0.74780	0.0000129170	38797	98.97951	99.99348	0.00648	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80880	-0.0002307580	0.82690	0.0002307580	32408	82.67980	97.94269	2.05670	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20520	-0.0008021570	0.23340	0.0008021570	18810	47.98837	80.00270	19.99518	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53230	-0.0006707710	0.49300	0.0006707710	21585	55.06799	85.37251	14.62572	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20740	-0.0005505490	0.24610	0.0005505490	24256	61.88229	89.66436	10.33419	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06240	0.0002069970	0.06370	0.0002069970	33080	84.39421	98.33052	1.66893	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.54020	-0.0018826110	0.53990	0.0018826110	5169	13.18723	35.09646	64.89857	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02370	-0.0002071560	0.03250	0.0002071560	33075	84.38146	98.32779	1.67166	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68110	0.0004637860	0.66240	0.0004637860	26344	67.20923	92.45213	7.54664	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82710	0.0016084490	0.83800	0.0016084490	7366	18.79225	45.15754	54.83822	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58460	-0.0007131870	0.58040	0.0007131870	20591	52.53208	83.56129	16.43683	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23520	-0.0011870540	0.20870	0.0011870540	12303	31.38761	63.13780	36.85907	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25740	-0.0027551590	0.24290	0.0027551590	1486	3.79111	13.40569	86.58704	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik