SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0021681600	0.23640	0.0021681600	8967	20.89625	49.76635	50.23004	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0035937720	0.59520	0.0035937720	2671	6.22437	20.96161	79.03240	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0019327600	0.61180	0.0019327600	10941	25.49636	56.49543	43.50135	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	-0.0000556950	0.22770	0.0000556950	41639	97.03346	99.94223	0.05768	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0004339060	0.63230	0.0004339060	33158	77.26976	96.50775	3.49153	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0000460580	0.40350	0.0000460580	41854	97.53449	99.96033	0.03959	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0013170290	0.32560	0.0013170290	17923	41.76687	75.15741	24.84040	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0026401460	0.57680	0.0026401460	6073	14.15222	38.25615	61.73945	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0012096900	0.56780	0.0012096900	19474	45.38125	78.41635	21.58164	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0002109900	0.40800	0.0002109900	38114	88.81898	99.16228	0.83736	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0026870100	0.20270	0.0026870100	5851	13.63488	37.27151	62.72402	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0010342240	0.25200	0.0010342240	22081	51.45647	83.27641	16.72186	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0019491180	0.50700	0.0019491180	10815	25.20274	56.08813	43.90862	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0003271570	0.25970	0.0003271570	35500	82.72744	97.99303	2.00643	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0021696450	0.47910	0.0021696450	8954	20.86596	49.71940	50.27699	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik