SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0021368800	0.23790	0.0021368800	9290	21.64896	50.93664	49.05980	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0037169940	0.59330	0.0037169940	2373	5.52992	19.14063	80.85318	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0016594290	0.62370	0.0016594290	13678	31.87453	64.70202	35.29521	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	-0.0002197810	0.22730	0.0002197810	37867	88.24338	99.06742	0.93221	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0002535110	0.63580	0.0002535110	37100	86.45600	98.76452	1.23506	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0003079270	0.40280	0.0003079270	35912	83.68755	98.20941	1.79007	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0010745420	0.32250	0.0010745420	21400	49.86950	82.10371	17.89450	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0027334990	0.57560	0.0027334990	5593	13.03365	36.08651	63.90893	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0013979130	0.56920	0.0013979130	16824	39.20582	72.70374	27.29393	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0000853940	0.40400	0.0000853940	40995	95.53272	99.86415	0.13571	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0024964800	0.20290	0.0024964800	6844	15.94892	41.53492	58.46092	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0014939720	0.25290	0.0014939720	15644	36.45600	69.86367	30.13384	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0021378190	0.50880	0.0021378190	9283	21.63264	50.91172	49.08472	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0003732540	0.26050	0.0003732540	34428	80.22931	97.36977	2.62961	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0020113100	0.48180	0.0020113100	10256	23.90007	54.27509	45.72156	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik