SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44010	-0.0002019280	0.44040	0.0002019280	34814	88.98602	99.15224	0.84736	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06330	-0.0003277000	0.08680	0.0003277000	32184	82.26363	97.77375	2.22560	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.76160	-0.0016733670	0.75420	0.0016733670	11262	28.78614	59.66412	40.33255	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80110	-0.0013443880	0.82500	0.0013443880	14896	38.07479	70.52004	29.47728	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21120	0.0002148650	0.23730	0.0002148650	34527	88.25243	99.03320	0.96637	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53470	-0.0033145040	0.49600	0.0033145040	2162	5.52616	18.15486	81.83855	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20650	-0.0005899160	0.24160	0.0005899160	26860	68.65527	92.94027	7.05856	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.05990	-0.0015819340	0.06310	0.0015819340	12190	31.15814	62.66430	37.33255	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.54690	-0.0025745340	0.53780	0.0025745340	4646	11.87537	32.48078	67.51410	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02510	-0.0004262850	0.03150	0.0004262850	30089	76.90872	96.20281	3.79634	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.67680	-0.0005054300	0.65240	0.0005054300	28543	72.95708	94.76944	5.22956	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82730	0.0013887850	0.84460	0.0013887850	14338	36.64852	69.00084	30.99640	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58620	-0.0046238780	0.58320	0.0046238780	490	1.25246	5.42408	94.56672	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23300	-0.0006245500	0.20380	0.0006245500	26153	66.84815	92.08617	7.91259	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25910	-0.0021099200	0.23290	0.0021099200	7455	19.05529	45.46066	54.53515	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik