SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44090	-0.0008394230	0.44600	0.0008394230	22228	56.70842	86.31033	13.68798	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06550	-0.0001960420	0.08790	0.0001960420	34897	89.02977	99.14283	0.85677	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.76710	-0.0015977940	0.75360	0.0015977940	11834	30.19109	61.44021	38.55657	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80270	-0.0013075720	0.82270	0.0013075720	15242	38.88563	71.35654	28.64083	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21020	0.0003048060	0.23320	0.0003048060	32510	82.94002	97.93583	2.06355	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53440	-0.0040265910	0.49680	0.0040265910	906	2.31140	9.01957	90.97233	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20750	-0.0005089770	0.24310	0.0005089770	28338	72.29635	94.53878	5.46020	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.05870	-0.0016043910	0.06220	0.0016043910	11766	30.01760	61.22114	38.77563	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.55060	-0.0026447940	0.54290	0.0026447940	4211	10.74317	30.13443	69.86025	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02320	-0.0003028620	0.03180	0.0003028620	32560	83.06758	97.96638	2.03301	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.67310	-0.0009083890	0.65750	0.0009083890	21046	53.69288	84.23232	15.76585	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82800	0.0018315090	0.84310	0.0018315090	9475	24.17277	53.31779	46.67853	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58670	-0.0044656900	0.57800	0.0044656900	552	1.40827	6.00410	93.98692	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.22990	-0.0005360500	0.20200	0.0005360500	27807	70.94165	93.98082	6.01810	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.26200	-0.0021379460	0.23970	0.0021379460	7034	17.94525	43.60207	56.39363	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik