SNP formula

Podatkovno skladišče GOVEDO

Mobile Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18510	-0.0003563210	0.24210	0.0003563210	35908	83.00509	97.99251	2.00694	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05430	0.0000673340	0.10790	0.0000673340	41833	96.70134	99.92331	0.07658	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.55060	-0.0013387750	0.59640	0.0013387750	19023	43.97365	76.88264	23.11530	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.61820	-0.0003332710	0.61540	0.0003332710	36410	84.16551	98.25862	1.74087	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20670	0.0001060100	0.22630	0.0001060100	41081	94.96301	99.82349	0.17635	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59280	0.0004759440	0.64020	0.0004759440	33492	77.42025	96.44334	3.55593	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47390	0.0030411590	0.40350	0.0030411590	5116	11.82617	33.35767	66.63765	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.01520	-0.0010450790	0.05090	0.0010450790	23269	53.78872	84.66000	15.33839	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.25900	-0.0026029450	0.32230	0.0026029450	7348	16.98567	43.01126	56.98473	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54870	0.0007698660	0.57950	0.0007698660	27910	64.51687	91.12379	8.87502	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.55840	0.0023969280	0.56860	0.0023969280	8614	19.91216	47.88512	52.11119	rs41585816
UA-IFASA-9174	1	64592861	1363	0.36970	0.0017786350	0.40620	0.0017786350	13864	32.04808	64.57774	35.41952	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.06230	0.0005785330	0.09390	0.0005785330	31436	72.66759	94.77997	5.21914	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.12090	-0.0002947100	0.20450	0.0002947100	37132	85.83449	98.60734	1.39220	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24350	0.0002490130	0.25080	0.0002490130	38076	88.01664	99.00275	0.99687	rs41598314

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik