SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0011737140	0.24010	0.0011737140	21766	51.09270	82.77262	17.22562	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0012882870	0.59060	0.0012882870	20205	47.42846	79.88808	20.10998	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	0.0003326070	0.61470	0.0003326070	35950	84.38769	98.36782	1.63168	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	-0.0003587040	0.22680	0.0003587040	35453	83.22105	98.10944	1.89002	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0008260930	0.63530	0.0008260930	27033	63.45626	90.65068	9.34807	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0022759690	0.40660	0.0022759690	10030	23.54405	53.34388	46.65270	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0030523160	0.32370	0.0030523160	5484	12.87294	35.33922	64.65619	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0005724020	0.57630	0.0005724020	31487	73.91141	95.33040	4.66874	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0026377380	0.57070	0.0026377380	7631	17.91273	44.49974	55.49629	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0022784590	0.40550	0.0022784590	10011	23.49945	53.27881	46.71776	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0001414210	0.20260	0.0001414210	39672	93.12457	99.69002	0.30977	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0005924060	0.25140	0.0005924060	31122	73.05462	95.01082	4.98829	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0023630430	0.50840	0.0023630430	9417	22.10511	51.20565	48.79079	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	-0.0008405040	0.25930	0.0008405040	26787	62.87881	90.34251	9.65622	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0002168860	0.47940	0.0002168860	38179	89.61996	99.28780	0.71187	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik