SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0007260920	0.23790	0.0007260920	28650	66.76454	92.30098	7.69791	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0013134990	0.59330	0.0013134990	19505	45.45349	78.28880	21.70919	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0000989590	0.62370	0.0000989590	40877	95.25774	99.84407	0.15578	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0000351050	0.22730	0.0000351050	42195	98.32914	99.98033	0.01961	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0005578340	0.63580	0.0005578340	31694	73.85813	95.28123	4.71792	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0027352850	0.40280	0.0027352850	6829	15.91396	41.18100	58.81483	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0028931140	0.32250	0.0028931140	5980	13.93550	37.53921	62.45638	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0008286920	0.57560	0.0008286920	26832	62.52796	90.14234	9.85640	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0027999280	0.56920	0.0027999280	6466	15.06805	39.64914	60.34659	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0019907940	0.40400	0.0019907940	12048	28.07606	59.74421	40.25275	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0000123700	0.20290	0.0000123700	42672	99.44072	99.99770	0.00228	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0002893310	0.25290	0.0002893310	37016	86.26025	98.70871	1.29085	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0026070700	0.50880	0.0026070700	7533	17.55453	44.04916	55.94686	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0009542760	0.26050	0.0009542760	24720	57.60626	87.27277	12.72577	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0005891820	0.48180	0.0005891820	31109	72.49487	94.76945	5.22965	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik