SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0008933660	0.23640	0.0008933660	25856	60.25354	88.90256	11.09609	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0009737120	0.59520	0.0009737120	24636	57.41051	87.18040	12.81813	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0000422350	0.61180	0.0000422350	42023	97.92832	99.97178	0.02816	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0000116310	0.22770	0.0000116310	42646	99.38013	99.99752	0.00246	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0004763620	0.63230	0.0004763620	33354	77.72651	96.60645	3.39283	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0025580740	0.40350	0.0025580740	7990	18.61950	45.82493	54.17120	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0028843970	0.32560	0.0028843970	6135	14.29670	38.20210	61.79353	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0008512550	0.57680	0.0008512550	26545	61.85915	89.81148	10.18724	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0027739790	0.56780	0.0027739790	6726	15.67394	40.73092	59.26488	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0019460490	0.40800	0.0019460490	12618	29.40436	61.44784	38.54922	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0002009400	0.20270	0.0002009400	38761	90.32672	99.36942	0.63027	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0004132050	0.25200	0.0004132050	34576	80.57420	97.42557	2.57380	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0025826020	0.50700	0.0025826020	7857	18.30956	45.30783	54.68827	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0011744560	0.25970	0.0011744560	21588	50.30761	82.23709	17.76113	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0002910550	0.47910	0.0002910550	37002	86.22763	98.71415	1.28541	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik