SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43680	-0.0023532940	0.43950	0.0023532940	5807	14.84293	37.98431	62.01095	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	0.0006632970	0.08420	0.0006632970	25411	64.95156	91.11426	8.88440	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75320	-0.0001088480	0.74480	0.0001088480	36722	93.86295	99.73330	0.26648	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	-0.0006740860	0.82370	0.0006740860	25209	64.43524	90.84222	9.15642	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0019708620	0.23420	0.0019708620	8335	21.30460	48.94635	51.04968	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	-0.0033553460	0.49450	0.0033553460	1994	5.09675	16.71965	83.27360	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20350	-0.0005465960	0.24120	0.0005465960	27616	70.58763	93.79731	6.20159	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	0.0006333660	0.06370	0.0006333660	25972	66.38550	91.84669	8.15203	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53610	-0.0024339410	0.53470	0.0024339410	5317	13.59047	35.62329	64.37181	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0004110400	0.03290	0.0004110400	30308	77.46850	96.39575	3.60342	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	0.0005128020	0.65530	0.0005128020	28302	72.34108	94.52889	5.47008	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	-0.0016687550	0.84360	0.0016687550	11083	28.32860	58.98648	41.01016	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	-0.0024920610	0.58490	0.0024920610	5005	12.79299	34.07599	65.91899	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0014680780	0.21070	0.0014680780	13264	33.90333	65.86534	34.13171	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25670	0.0028099620	0.23250	0.0028099620	3592	9.18130	26.55115	73.44319	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik