SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0035131510	0.24010	0.0035131510	4041	9.48569	28.07710	71.91772	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0009850960	0.59060	0.0009850960	24902	58.45403	87.71447	12.28407	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0012983230	0.61470	0.0012983230	20550	48.23830	80.40085	19.59724	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0024953940	0.22680	0.0024953940	8840	20.75069	48.85099	51.14533	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0019767470	0.63530	0.0019767470	12927	30.34436	62.24866	37.74843	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0019568550	0.40660	0.0019568550	13118	30.79270	62.80249	37.19463	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	0.0029577250	0.32370	0.0029577250	6180	14.50670	38.21885	61.77679	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0009901800	0.57630	0.0009901800	24823	58.26859	87.59944	12.39910	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0028149380	0.57070	0.0028149380	6886	16.16394	41.22037	58.77548	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0009848890	0.40550	0.0009848890	24907	58.46576	87.72173	12.27682	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0036724680	0.20260	0.0036724680	3564	8.36600	25.55001	74.44457	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	-0.0003576930	0.25140	0.0003576930	35644	83.66940	98.16666	1.83282	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	0.0013605990	0.50840	0.0013605990	19695	46.23131	78.72590	21.27210	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0030823870	0.25930	0.0030823870	5593	13.12880	35.60645	64.38900	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0057256540	0.47940	0.0057256540	620	1.45536	6.35398	93.63758	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik