SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0034035390	0.23640	0.0034035390	4409	10.27452	29.82357	70.17144	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0011277020	0.59520	0.0011277020	22895	53.35337	84.30924	15.68910	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0014055600	0.61180	0.0014055600	19212	44.77069	77.49193	22.50600	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0025558190	0.22770	0.0025558190	8486	19.77535	47.35715	52.63910	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0021527470	0.63230	0.0021527470	11402	26.57066	57.37850	42.61834	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0022239890	0.40350	0.0022239890	10806	25.18177	55.46514	44.53159	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0024570280	0.32560	0.0024570280	9121	21.25513	49.69089	50.30551	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0007636850	0.57680	0.0007636850	28584	66.61074	92.15739	7.84149	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0025312390	0.56780	0.0025312390	8634	20.12025	47.90931	52.08697	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0008640170	0.40800	0.0008640170	26896	62.67711	90.14262	9.85611	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0034792120	0.20270	0.0034792120	4127	9.61736	28.40108	71.59382	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0000491370	0.25200	0.0000491370	41944	97.74422	99.96492	0.03501	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0012685780	0.50700	0.0012685780	20928	48.76957	80.85374	19.14440	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0030471900	0.25970	0.0030471900	5794	13.50205	36.36422	63.63131	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0062069060	0.47910	0.0062069060	420	0.97875	4.59744	95.39345	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik