SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43690	0.0007551630	0.44140	0.0007551630	23476	60.00562	88.39824	11.60023	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06010	-0.0014048430	0.08380	0.0014048430	13905	35.54175	67.82321	32.17394	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75380	-0.0000164490	0.74760	0.0000164490	38796	99.16417	99.99466	0.00530	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80190	-0.0014130800	0.82220	0.0014130800	13815	35.31171	67.56610	32.43104	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20480	-0.0000624560	0.23390	0.0000624560	37765	96.52890	99.91288	0.08699	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53380	0.0009713740	0.49220	0.0009713740	19895	50.85244	82.15028	17.84775	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20340	-0.0003055940	0.24070	0.0003055940	32437	82.91031	97.92139	2.07799	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06390	0.0011242420	0.06420	0.0011242420	17624	45.04767	77.33369	22.66404	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53650	-0.0008842020	0.53610	0.0008842020	21269	54.36444	84.73715	15.26106	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0016604120	0.03310	0.0016604120	11117	28.41551	59.17975	40.81688	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68500	0.0028455750	0.65300	0.0028455750	3395	8.67776	25.47837	74.51586	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82750	-0.0007193670	0.84460	0.0007193670	24117	61.64405	89.35648	10.64206	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58750	0.0003773510	0.58520	0.0003773510	30883	78.93822	96.84358	3.15565	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24070	0.0020071640	0.21130	0.0020071640	8056	20.59147	47.86446	52.13147	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25710	0.0011456520	0.23240	0.0011456520	17340	44.32175	76.68013	23.31755	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik