SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44010	-0.0024646860	0.44710	0.0024646860	3261	8.31951	24.77654	75.21765	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06480	-0.0001265310	0.08570	0.0001265310	35904	91.59885	99.50672	0.49298	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.76700	-0.0009405260	0.75240	0.0009405260	18028	45.99332	78.26608	21.73170	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80310	0.0020043200	0.82030	0.0020043200	5859	14.94757	38.36202	61.63325	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20800	-0.0018486460	0.23160	0.0018486460	7005	17.87127	43.56912	56.42652	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53520	0.0003881990	0.49060	0.0003881990	29239	74.59499	95.47441	4.52467	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20600	-0.0014040510	0.23810	0.0014040510	11352	28.96140	60.05941	39.93728	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.05960	0.0003409870	0.06350	0.0003409870	30420	77.60798	96.48904	3.51015	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.55010	0.0016846140	0.54070	0.0016846140	8381	21.38174	49.29315	50.70288	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02260	0.0005470100	0.03130	0.0005470100	25686	65.53053	91.56960	8.42911	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.67350	0.0005705930	0.65370	0.0005705930	25162	64.19369	90.87899	9.11966	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82840	0.0000581020	0.84280	0.0000581020	37686	96.14511	99.89532	0.10454	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58650	0.0030623500	0.57560	0.0030623500	1530	3.90336	13.63568	86.35709	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23020	0.0022708210	0.20340	0.0022708210	4229	10.78909	30.17432	69.82033	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.26090	0.0024656470	0.23670	0.0024656470	3255	8.30421	24.74165	75.25253	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik