SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0015529120	0.23790	0.0015529120	17328	40.38031	73.70640	26.29133	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0037571110	0.59330	0.0037571110	3389	7.89756	24.72601	75.26850	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0025697210	0.62370	0.0025697210	8516	19.84526	47.78045	52.21579	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0026220080	0.22730	0.0026220080	8206	19.12286	46.60371	53.39245	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0046629650	0.63580	0.0046629650	1636	3.81245	14.09193	85.90125	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0012769630	0.40280	0.0012769630	20749	48.35244	80.76160	19.23653	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0013982860	0.32250	0.0013982860	19159	44.64718	77.65313	22.34483	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0002960360	0.57560	0.0002960360	37011	86.24860	98.73442	1.26515	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0023361670	0.56920	0.0023361670	10112	23.56450	53.50706	46.48953	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0007186400	0.40400	0.0007186400	29219	68.09051	92.97724	7.02171	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0021646730	0.20290	0.0021646730	11405	26.57765	57.75549	42.24135	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0042108390	0.25290	0.0042108390	2340	5.45302	18.64160	81.35225	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0003156930	0.50880	0.0003156930	36615	85.32578	98.55723	1.44231	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0030423250	0.26050	0.0030423250	5916	13.78635	37.15415	62.84140	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0023680650	0.48180	0.0023680650	9902	23.07513	52.78157	47.21497	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik