SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	-0.0002033310	0.44260	0.0002033310	32241	82.25584	97.67871	2.32062	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	-0.0006103820	0.08410	0.0006103820	19861	50.67099	81.26816	18.72982	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75710	-0.0001820760	0.74420	0.0001820760	32957	84.08256	98.13604	1.86335	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0002637330	0.82190	0.0002637330	30269	77.22472	96.15801	3.84112	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	-0.0023162480	0.22950	0.0023162480	1073	2.73752	10.11690	89.87543	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	-0.0001716680	0.49300	0.0001716680	33313	84.99082	98.34487	1.65456	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20440	-0.0017141320	0.24320	0.0017141320	3328	8.49066	24.79333	75.20099	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	-0.0007042360	0.06440	0.0007042360	17464	44.55557	76.05847	23.93920	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53880	0.0011753730	0.53830	0.0011753730	8466	21.59914	48.69919	51.29691	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0005118770	0.03310	0.0005118770	22634	57.74569	86.41493	13.58338	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	0.0009171150	0.66300	0.0009171150	12797	32.64874	63.60805	36.38892	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82850	0.0010402880	0.84200	0.0010402880	10562	26.94663	56.37169	43.62487	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58820	0.0023601120	0.58320	0.0023601120	979	2.49770	9.38950	90.60269	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23840	0.0019898130	0.20910	0.0019898130	2013	5.13573	16.77060	83.22280	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	0.0007839000	0.23840	0.0007839000	15604	39.81018	71.48330	28.51411	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik