SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43690	0.0000576280	0.43940	0.0000576280	37163	94.99016	99.81352	0.18629	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	-0.0006073180	0.08420	0.0006073180	19717	50.39746	80.96786	19.03010	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75320	-0.0002340790	0.74470	0.0002340790	31118	79.53889	96.87318	3.12604	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	0.0001975300	0.82360	0.0001975300	32309	82.58314	97.73415	2.26519	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0023441170	0.23430	0.0023441170	954	2.43846	9.19116	90.80098	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	-0.0004089850	0.49450	0.0004089850	25565	65.34519	90.89977	9.09885	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20360	-0.0014955500	0.24100	0.0014955500	4698	12.00828	32.08675	67.90823	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	-0.0005669390	0.06370	0.0005669390	20879	53.36758	83.25702	16.74108	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53610	0.0013012520	0.53470	0.0013012520	6651	17.00023	41.22702	58.76861	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0005917800	0.03290	0.0005917800	20166	51.54513	81.87129	18.12672	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	0.0009573910	0.65530	0.0009573910	11798	30.15617	60.51448	39.48231	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	0.0009607930	0.84360	0.0009607930	11736	29.99770	60.31500	39.68178	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	0.0026258950	0.58490	0.0026258950	568	1.45183	5.99128	93.99991	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0020987990	0.21070	0.0020987990	1567	4.00532	13.74321	86.24974	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25680	0.0005549910	0.23240	0.0005549910	21213	54.22130	83.88582	16.11232	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik