SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0027567510	0.23790	0.0027567510	4268	9.94594	29.32713	70.66777	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0005703240	0.59330	0.0005703240	29222	68.09750	92.97944	7.01950	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0032927530	0.62370	0.0032927530	2483	5.78626	19.40679	80.58712	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0054562460	0.22730	0.0054562460	235	0.54763	2.79506	97.19484	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0020367520	0.63580	0.0020367520	8528	19.87323	47.94947	52.04676	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0009161820	0.40280	0.0009161820	22249	51.84797	83.45811	16.54020	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0005650910	0.32250	0.0005650910	29342	68.37714	93.10556	6.89340	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0032823000	0.57560	0.0032823000	2505	5.83753	19.54065	80.45328	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0022857270	0.56920	0.0022857270	6764	15.76249	40.89839	59.09738	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0002514140	0.40400	0.0002514140	36592	85.27218	98.52859	1.47095	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0000081850	0.20290	0.0000081850	42740	99.59918	99.99865	0.00134	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0020399560	0.25290	0.0020399560	8508	19.82662	47.87402	52.12221	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0004576010	0.50880	0.0004576010	31737	73.95833	95.36705	4.63211	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0039484660	0.26050	0.0039484660	1226	2.85701	11.07394	88.91876	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0029370540	0.48180	0.0029370540	3583	8.34965	25.72411	74.27045	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik