SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	-0.0018995030	0.44240	0.0018995030	5968	15.22566	38.61576	61.37961	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	-0.0008263470	0.08410	0.0008263470	19723	50.31763	81.54773	18.45026	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75700	0.0009957610	0.74390	0.0009957610	16657	42.49560	74.74058	25.25700	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0005918780	0.82200	0.0005918780	24433	62.33385	89.65826	10.34030	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	-0.0012017000	0.22940	0.0012017000	13466	34.35467	66.20910	33.78797	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	-0.0003378060	0.49320	0.0003378060	30439	77.65645	96.44704	3.55214	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20440	-0.0012451420	0.24310	0.0012451420	12830	32.73210	64.31331	35.68366	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	0.0000314940	0.06440	0.0000314940	38331	97.79065	99.96602	0.03390	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53880	0.0003457940	0.53850	0.0003457940	30253	77.18193	96.29198	3.70718	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0012073810	0.03310	0.0012073810	13374	34.11996	65.93893	34.05813	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	0.0009620800	0.66310	0.0009620800	17272	44.06460	76.20774	23.78992	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82850	0.0007478420	0.84210	0.0007478420	21228	54.15721	84.43569	15.56248	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58810	0.0016972090	0.58320	0.0016972090	7624	19.45047	45.86183	54.13403	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23840	0.0035172300	0.20900	0.0035172300	681	1.73738	6.96431	93.02712	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	0.0021497010	0.23830	0.0021497010	4377	11.16667	30.78243	69.21232	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik