SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0013400180	0.23790	0.0013400180	17385	40.51314	73.73221	26.26552	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0013158560	0.59330	0.0013158560	17714	41.27983	74.47190	25.52587	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0030411980	0.62370	0.0030411980	4082	9.51249	28.35839	71.63646	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0050171640	0.22730	0.0050171640	641	1.49375	6.57457	93.41693	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0026234060	0.63580	0.0026234060	6006	13.99609	37.54856	62.44700	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0021769190	0.40280	0.0021769190	8705	20.28570	48.45049	51.54583	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0023455750	0.32250	0.0023455750	7561	17.61978	44.07469	55.92134	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0015614840	0.57560	0.0015614840	14589	33.99748	66.87530	33.12206	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0045446210	0.56920	0.0045446210	1014	2.36298	9.58431	90.40800	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0003536090	0.40400	0.0003536090	34903	81.33622	97.62553	2.37387	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0001413940	0.20290	0.0001413940	39667	92.43801	99.61204	0.38772	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0001061600	0.25290	0.0001061600	40469	94.30695	99.78032	0.21950	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0004530850	0.50880	0.0004530850	32799	76.43317	96.18925	3.80998	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0037901070	0.26050	0.0037901070	2008	4.67934	16.52724	83.46635	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0028932930	0.48180	0.0028932930	4691	10.93167	31.41592	68.57918	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik