SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0010258080	0.23640	0.0010258080	21921	51.08480	82.76715	17.23110	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0012285880	0.59520	0.0012285880	18846	43.91881	76.88862	23.10930	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0024421950	0.61180	0.0024421950	6922	16.13106	41.44737	58.54848	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0048813890	0.22770	0.0048813890	715	1.66624	7.19594	92.79576	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0027605930	0.63230	0.0027605930	5210	12.14141	33.89015	66.10515	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0022774130	0.40350	0.0022774130	7941	18.50574	45.52964	54.46648	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0022902390	0.32560	0.0022902390	7852	18.29834	45.18400	54.81211	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0014857480	0.57680	0.0014857480	15370	35.81832	68.87699	31.12048	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0045054650	0.56780	0.0045054650	1012	2.35837	9.56656	90.42578	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0004494720	0.40800	0.0004494720	32823	76.49088	96.16907	3.83017	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0001995520	0.20270	0.0001995520	38364	89.40365	99.22119	0.77847	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0003155480	0.25200	0.0003155480	35805	83.44014	98.10945	1.89002	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0004464240	0.50700	0.0004464240	32882	76.62837	96.21403	3.78521	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0037584020	0.25970	0.0037584020	2053	4.78432	16.80268	83.19093	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0026860500	0.47910	0.0026860500	5606	13.06425	35.72312	64.27231	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik