SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	-0.0010894460	0.44220	0.0010894460	15444	39.40097	71.71496	28.28244	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06240	-0.0003312070	0.08520	0.0003312070	30790	78.55193	96.72425	3.27496	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75670	0.0014015420	0.74410	0.0014015420	11082	28.27257	58.79829	41.19836	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80820	-0.0000099980	0.82580	0.0000099980	38943	99.35199	99.99713	0.00285	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0010151380	0.23110	0.0010151380	16641	42.45478	74.72540	25.27218	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53220	-0.0000242930	0.49100	0.0000242930	38556	98.36467	99.98153	0.01841	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20620	-0.0008922120	0.24510	0.0008922120	18811	47.99092	79.66413	20.33374	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06290	0.0010668350	0.06400	0.0010668350	15792	40.28880	72.61216	27.38529	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.54040	-0.0007681320	0.53940	0.0007681320	21101	53.83320	84.20589	15.79227	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02420	0.0004206080	0.03340	0.0004206080	28642	73.07192	94.79676	5.20224	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68150	0.0011846330	0.66110	0.0011846330	13963	35.62262	67.69140	32.30577	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	-0.0004441680	0.84070	0.0004441680	28084	71.64834	94.22018	5.77876	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58650	-0.0013871830	0.58170	0.0013871830	11271	28.75475	59.42822	40.56846	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23620	0.0025076380	0.20960	0.0025076380	3002	7.65875	23.05211	76.94189	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25880	0.0027625890	0.24130	0.0027625890	2134	5.44429	17.58992	82.40348	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik