SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0020688950	0.23640	0.0020688950	10721	24.98369	55.11402	44.88268	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0016068510	0.59520	0.0016068510	15249	35.53551	68.28853	31.70891	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0018861050	0.61180	0.0018861050	12308	28.68195	60.12059	39.87640	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0031976100	0.22770	0.0031976100	4149	9.66862	28.32784	71.66706	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0037732160	0.63230	0.0037732160	2485	5.79092	19.13077	80.86321	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0008409320	0.40350	0.0008409320	26321	61.33716	89.35211	10.64655	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0022192780	0.32560	0.0022192780	9499	22.13600	50.93622	49.06024	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0008697120	0.57680	0.0008697120	25806	60.13702	88.64917	11.34944	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0016842310	0.56780	0.0016842310	14371	33.48947	65.98460	34.01271	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0009018790	0.40800	0.0009018790	25254	58.85067	87.86893	12.12963	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0015366200	0.20270	0.0015366200	16050	37.40213	70.29668	29.70087	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0006867500	0.25200	0.0006867500	29019	67.62444	92.63495	7.36396	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0005110110	0.50700	0.0005110110	32274	75.20973	95.73728	4.26191	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0035368100	0.25970	0.0035368100	3068	7.14952	22.53195	77.46241	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0020189860	0.47910	0.0020189860	11163	26.01370	56.55499	43.44178	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik