SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43700	-0.0000325450	0.43940	0.0000325450	38418	98.19799	99.97710	0.02283	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06040	-0.0017742170	0.08460	0.0017742170	10563	26.99946	57.26367	42.73283	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75290	0.0021042480	0.74650	0.0021042480	7800	19.93712	46.74597	53.24988	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80610	-0.0011453090	0.82630	0.0011453090	17820	45.54865	77.79309	22.20465	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20590	0.0002930370	0.23660	0.0002930370	32838	83.93528	98.20059	1.79883	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53290	-0.0014345700	0.49010	0.0014345700	14084	35.99928	68.33533	31.66184	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20520	0.0004605760	0.24240	0.0004605760	29397	75.13994	95.64725	4.35184	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06360	0.0016367140	0.06370	0.0016367140	11839	30.26097	61.55163	38.44514	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53800	-0.0003288550	0.53640	0.0003288550	32065	81.95946	97.72637	2.27298	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02600	0.0004063190	0.03340	0.0004063190	30525	78.02316	96.61078	3.38842	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68330	0.0028646060	0.65270	0.0028646060	3650	9.32955	26.76783	73.22652	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82640	-0.0029553950	0.84260	0.0029553950	3296	8.42471	24.73900	75.25517	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58590	0.0005074530	0.58560	0.0005074530	28465	72.75771	94.75855	5.24045	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23870	0.0022326880	0.21330	0.0022326880	6876	17.57534	42.79848	57.19713	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25610	0.0022217040	0.23450	0.0022217040	6961	17.79260	43.17133	56.82429	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik