SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	0.0001525800	0.44310	0.0001525800	35882	91.54272	99.49406	0.50564	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06200	-0.0017841830	0.08440	0.0017841830	10263	26.18313	56.20050	43.79597	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75680	0.0026651330	0.74560	0.0026651330	4449	11.35036	31.15898	68.83574	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80790	-0.0005572060	0.82480	0.0005572060	27543	70.26813	93.71808	6.28082	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0001379250	0.23190	0.0001379250	36219	92.40248	99.59099	0.40873	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53180	-0.0003745300	0.48750	0.0003745300	31162	79.50098	97.04399	2.95527	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20600	-0.0000289160	0.24440	0.0000289160	38601	98.47948	99.98279	0.01715	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06310	0.0011435470	0.06440	0.0011435470	17750	45.28408	77.54558	22.45215	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.54060	0.0000891370	0.54050	0.0000891370	37284	95.11952	99.82989	0.16994	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02430	0.0004373310	0.03360	0.0004373310	29894	76.26604	96.02443	3.97470	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68170	0.0024786090	0.66100	0.0024786090	5353	13.65666	35.75460	64.24049	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82750	-0.0023469970	0.84050	0.0023469970	6091	15.53945	39.28155	60.71381	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58680	0.0007074800	0.58240	0.0007074800	24687	62.98186	90.14744	9.85116	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23660	0.0024101500	0.21150	0.0024101500	5734	14.62867	37.59940	62.39582	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25890	0.0023911550	0.24080	0.0023911550	5839	14.89655	38.09899	61.89628	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik