SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	0.0002198590	0.23790	0.0002198590	37714	87.88684	99.02854	0.97108	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0006500080	0.59330	0.0006500080	28371	66.11437	92.13401	7.86488	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0032902920	0.62370	0.0032902920	3180	7.41051	23.54288	76.45148	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0026365160	0.22730	0.0026365160	5751	13.40185	36.47008	63.52540	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0026052260	0.63580	0.0026052260	5912	13.77703	37.19351	62.80203	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0018013380	0.40280	0.0018013380	11883	27.69155	59.39545	40.60146	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0014361880	0.32250	0.0014361880	15916	37.08986	70.53250	29.46504	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0042613230	0.57560	0.0042613230	1225	2.85468	11.10684	88.88586	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0004929490	0.56920	0.0004929490	31652	73.76025	95.34635	4.65281	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0016952920	0.40400	0.0016952920	12908	30.08016	62.47021	37.52689	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0005651480	0.20290	0.0005651480	30129	70.21113	93.96436	6.03467	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0025234970	0.25290	0.0025234970	6393	14.89793	39.30881	60.68686	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0005252110	0.50880	0.0005252110	30981	72.19659	94.76126	5.23784	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0022406970	0.26050	0.0022406970	8227	19.17179	46.78334	53.21282	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0018988400	0.48180	0.0018988400	10985	25.59890	56.54723	43.44951	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik