SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	0.0000053990	0.23640	0.0000053990	42777	99.68540	99.99937	0.00062	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0006538630	0.59520	0.0006538630	28413	66.21225	92.16723	7.83166	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0027445580	0.61180	0.0027445580	5323	12.40446	34.51585	65.47947	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0026464260	0.22770	0.0026464260	5822	13.56730	36.81077	63.18472	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0027590290	0.63230	0.0027590290	5249	12.23201	34.16877	65.82652	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0019627620	0.40350	0.0019627620	10474	24.40809	54.87446	45.12220	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0014942760	0.32560	0.0014942760	15240	35.51454	68.83466	31.16279	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0042724660	0.57680	0.0042724660	1247	2.90595	11.28936	88.70335	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0005094540	0.56780	0.0005094540	31398	73.16834	95.12123	4.87791	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0019111050	0.40800	0.0019111050	10981	25.58958	56.54837	43.44837	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0007303870	0.20270	0.0007303870	26979	62.87053	90.47372	9.52504	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0024287380	0.25200	0.0024287380	7046	16.41965	42.09707	57.89879	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0006979460	0.50700	0.0006979460	27599	64.31534	91.22923	8.76958	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0021753040	0.25970	0.0021753040	8819	20.55136	49.04235	50.95394	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0016965920	0.47910	0.0016965920	13005	30.30621	62.76893	37.22818	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik