SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0002515090	0.24010	0.0002515090	36822	86.43459	98.77127	1.22830	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	0.0006939230	0.59060	0.0006939230	27621	64.83651	91.53199	8.46683	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0023031040	0.61470	0.0023031040	8007	18.79533	46.15135	53.84475	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0025211260	0.22680	0.0025211260	6658	15.62874	40.64987	59.34586	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0024090900	0.63530	0.0024090900	7330	17.20617	43.45269	56.54324	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0013787840	0.40660	0.0013787840	16878	39.61879	73.04749	26.95018	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	0.0019976730	0.32370	0.0019976730	10345	24.28347	54.64579	45.35083	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0045351940	0.57630	0.0045351940	1012	2.37553	9.58233	90.40999	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	-0.0003427510	0.57070	0.0003427510	34754	81.58024	97.73133	2.26809	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0018048130	0.40550	0.0018048130	12046	28.27633	60.11828	39.87867	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	0.0005806100	0.20260	0.0005806100	29835	70.03357	93.91851	6.08051	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0023453450	0.25140	0.0023453450	7731	18.14746	45.06607	54.92996	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	0.0001386150	0.50840	0.0001386150	39432	92.56121	99.63431	0.36546	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0017231620	0.25930	0.0017231620	12839	30.13779	62.48901	37.50807	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0017841410	0.47940	0.0017841410	12243	28.73876	60.71669	39.28029	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik