SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0024558150	0.23790	0.0024558150	7133	16.62239	42.78169	57.21425	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0007439600	0.59330	0.0007439600	27166	63.30630	90.67038	9.32839	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0048074880	0.62370	0.0048074880	942	2.19519	9.40202	90.59003	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0054770790	0.22730	0.0054770790	518	1.20712	5.81742	94.17352	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0001868840	0.63580	0.0001868840	38635	90.03309	99.34282	0.65687	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0002262060	0.40280	0.0002262060	37783	88.04763	99.05202	0.94760	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0010943110	0.32250	0.0010943110	21194	49.38945	81.63167	18.36652	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0030729090	0.57560	0.0030729090	4208	9.80611	29.54560	70.44932	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0008025050	0.56920	0.0008025050	26122	60.87342	89.33592	10.66276	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0019973750	0.40400	0.0019973750	10460	24.37547	54.98071	45.01599	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0005208060	0.20290	0.0005208060	31561	73.54819	95.25540	4.74374	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0025086350	0.25290	0.0025086350	6834	15.92562	41.55372	58.44213	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0000675210	0.50880	0.0000675210	41337	96.32970	99.91121	0.08867	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0018421460	0.26050	0.0018421460	11922	27.78244	59.62169	40.37526	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0048195600	0.48180	0.0048195600	930	2.16723	9.30649	90.68554	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik