SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0036021210	0.24010	0.0036021210	3646	8.55848	26.19529	73.79935	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0049025540	0.59060	0.0049025540	1220	2.86378	11.26144	88.73127	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	0.0006943200	0.61470	0.0006943200	29430	69.08289	93.44583	6.55313	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	-0.0007907640	0.22680	0.0007907640	27838	65.34588	91.68743	8.31139	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0007206830	0.63530	0.0007206830	28995	68.06178	92.98767	7.01125	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0008458790	0.40660	0.0008458790	26907	63.16049	90.55357	9.44517	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0018544320	0.32370	0.0018544320	13853	32.51802	65.07144	34.92580	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0021135270	0.57630	0.0021135270	11525	27.05336	58.20073	41.79612	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0039507410	0.57070	0.0039507410	2697	6.33084	20.86577	79.12835	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0008453820	0.40550	0.0008453820	26915	63.17927	90.56364	9.43510	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0013689890	0.20260	0.0013689890	19424	45.59517	78.33963	21.65833	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0001150890	0.25140	0.0001150890	40246	94.47196	99.79793	0.20190	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0029163340	0.50840	0.0029163340	6275	14.72970	38.82318	61.17248	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	-0.0008793620	0.25930	0.0008793620	26379	61.92108	89.87540	10.12329	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0016902770	0.47940	0.0016902770	15571	36.55079	69.59832	30.39917	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik