SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0033301220	0.23640	0.0033301220	4414	10.28617	29.99444	70.00058	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0052712710	0.59520	0.0052712710	840	1.95749	8.34150	91.65061	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0008682490	0.61180	0.0008682490	26512	61.78225	89.80384	10.19486	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	-0.0008428720	0.22770	0.0008428720	26938	62.77498	90.34954	9.64920	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0003908750	0.63230	0.0003908750	34966	81.48304	97.70236	2.29705	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0009830210	0.40350	0.0009830210	24714	57.59228	87.31767	12.68086	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0019414020	0.32560	0.0019414020	12904	30.07084	62.14722	37.84987	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0017366130	0.57680	0.0017366130	14971	34.88768	67.83664	32.16076	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0038201930	0.56780	0.0038201930	2925	6.81628	22.06287	77.93141	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0007505950	0.40800	0.0007505950	28485	66.38003	92.19396	7.80492	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0012379070	0.20270	0.0012379070	20985	48.90240	81.13202	18.86613	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0001400630	0.25200	0.0001400630	40027	93.27694	99.70231	0.29748	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0031928640	0.50700	0.0031928640	4963	11.56553	32.67435	67.32087	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0012544640	0.25970	0.0012544640	20797	48.46430	80.78121	19.21692	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0018394520	0.47910	0.0018394520	13924	32.44780	65.03343	34.96382	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik