SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0034661150	0.23790	0.0034661150	3970	9.25149	27.78163	72.21317	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0054430630	0.59330	0.0054430630	714	1.66387	7.32932	92.66251	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0006482480	0.62370	0.0006482480	30229	70.44416	94.03241	5.96662	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	-0.0010276740	0.22730	0.0010276740	23953	55.81889	86.19613	13.80233	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0004511100	0.63580	0.0004511100	33851	78.88469	97.01889	2.98044	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0007132100	0.40280	0.0007132100	29037	67.66639	92.81555	7.18338	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0018348940	0.32250	0.0018348940	13949	32.50606	65.12164	34.87561	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0013872530	0.57560	0.0013872530	18987	44.24636	77.23330	22.76462	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0038312650	0.56920	0.0038312650	2876	6.70209	21.81189	78.18236	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0005894230	0.40400	0.0005894230	31318	72.98192	95.04362	4.95549	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0009730540	0.20290	0.0009730540	24807	57.80900	87.47664	12.52190	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0001089800	0.25290	0.0001089800	40580	94.56562	99.81055	0.18928	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0033976810	0.50880	0.0033976810	4181	9.74320	28.86836	71.12654	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0012065780	0.26050	0.0012065780	21378	49.81823	81.88393	18.11426	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0019274630	0.48180	0.0019274630	13003	30.30155	62.45155	37.54556	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik