SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0020641540	0.24010	0.0020641540	9177	21.54175	50.50518	49.49119	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0037130680	0.59060	0.0037130680	1952	4.58205	16.12634	83.86713	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0014930290	0.61470	0.0014930290	14713	34.53675	67.64055	32.35682	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0037706670	0.22680	0.0037706670	1841	4.32149	15.39481	84.59856	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	-0.0036400390	0.63530	0.0036400390	2102	4.93416	17.09666	82.89693	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0019789370	0.40660	0.0019789370	9849	23.11918	52.89541	47.10111	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0007727490	0.32370	0.0007727490	25635	60.17464	88.96852	11.03012	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0006759290	0.57630	0.0006759290	27481	64.50788	91.31786	8.68095	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0027736130	0.57070	0.0027736130	4836	11.35185	32.25476	67.74035	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0004763930	0.40550	0.0004763930	31532	74.01704	95.41964	4.57952	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	0.0002897790	0.20260	0.0002897790	35741	83.89709	98.26341	1.73608	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0010763710	0.25140	0.0010763710	20483	48.08103	80.61888	19.37923	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0001286770	0.50840	0.0001286770	39533	92.79829	99.65507	0.34470	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0036824560	0.25930	0.0036824560	2006	4.70881	16.47796	83.51555	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0026033630	0.47940	0.0026033630	5680	13.33302	36.24809	63.74732	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik