SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0018469500	0.23640	0.0018469500	10663	24.84853	55.53759	44.45912	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0036326500	0.59520	0.0036326500	1999	4.65837	16.41938	83.57413	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0012882150	0.61180	0.0012882150	17082	39.80705	73.26152	26.73618	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0036673050	0.22770	0.0036673050	1941	4.52321	16.04152	83.95194	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0040740170	0.63230	0.0040740170	1266	2.95022	11.40352	88.58921	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0022148470	0.40350	0.0022148470	7776	18.12081	45.11293	54.88312	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0010357290	0.32560	0.0010357290	20899	48.70199	81.14706	18.85110	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0006438060	0.57680	0.0006438060	28024	65.30574	91.74206	8.25679	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0027971840	0.56780	0.0027971840	4541	10.58212	30.76089	69.23412	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0004375470	0.40800	0.0004375470	32458	75.63852	96.01017	3.98905	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0003679820	0.20270	0.0003679820	33995	79.22026	97.11344	2.88591	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0011201760	0.25200	0.0011201760	19553	45.56534	78.55991	21.43809	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0001061160	0.50700	0.0001061160	40276	93.85720	99.74576	0.25406	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0036771940	0.25970	0.0036771940	1923	4.48126	15.92361	84.06983	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0027765990	0.47910	0.0027765990	4642	10.81749	31.26304	68.73201	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik