SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0004457800	0.23640	0.0004457800	32273	75.20740	95.78622	4.21298	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0006955680	0.59520	0.0006955680	26980	62.87286	90.40010	9.59865	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0027027270	0.61180	0.0027027270	4911	11.44435	32.54620	67.44897	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0038753050	0.22770	0.0038753050	1538	3.58408	13.38523	86.60785	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0023731010	0.63230	0.0023731010	6702	15.61801	40.65209	59.34367	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0024018750	0.40350	0.0024018750	6530	15.21719	39.91849	60.07722	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0020248770	0.32560	0.0020248770	9116	21.24348	50.09776	49.89862	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0000337750	0.57680	0.0000337750	42135	98.18932	99.97632	0.02362	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0056146010	0.56780	0.0056146010	256	0.59657	3.06336	96.92661	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0028161980	0.40800	0.0028161980	4416	10.29083	30.10781	69.88715	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0006517140	0.20270	0.0006517140	27871	64.94920	91.47468	8.52415	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0022526290	0.25200	0.0022526290	7459	17.38208	43.77611	56.21987	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	-0.0003467550	0.50700	0.0003467550	34559	80.53458	97.40754	2.59184	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0037123490	0.25970	0.0037123490	1811	4.22026	15.23266	84.76071	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0013088460	0.47910	0.0013088460	16785	39.11493	72.52202	27.47564	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik