SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0008108120	0.24010	0.0008108120	24823	58.26859	87.73754	12.26101	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	0.0005001740	0.59060	0.0005001740	30988	72.74008	94.89228	5.10683	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0025927900	0.61470	0.0025927900	5570	13.07481	35.79609	64.19929	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0041003570	0.22680	0.0041003570	1255	2.94594	11.39844	88.59425	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	-0.0022754490	0.63530	0.0022754490	7401	17.37283	43.71714	56.27880	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0020791480	0.40660	0.0020791480	8768	20.58168	49.02048	50.97581	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0019043990	0.32370	0.0019043990	10209	23.96423	54.13634	45.86026	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	-0.0000077920	0.57630	0.0000077920	42412	99.55635	99.99876	0.00123	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0053267830	0.57070	0.0053267830	356	0.83566	4.05001	95.94048	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0019373280	0.40550	0.0019373280	9923	23.29288	53.15661	46.83993	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0007471610	0.20260	0.0007471610	25995	61.01969	89.36337	10.63529	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0018461110	0.25140	0.0018461110	10717	25.15669	55.83601	44.16069	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0002458330	0.50840	0.0002458330	36809	86.40408	98.74174	1.25782	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	0.0038053740	0.25930	0.0038053740	1685	3.95531	14.42151	85.57170	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0015498600	0.47940	0.0015498600	13803	32.40065	65.14927	34.84797	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik