SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	-0.0010796790	0.44270	0.0010796790	17547	44.76618	76.65825	23.33944	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06180	0.0001739670	0.08410	0.0001739670	35221	89.85637	99.25819	0.74143	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75700	0.0009617130	0.74430	0.0009617130	19395	49.48083	80.68985	19.30810	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0011667210	0.82220	0.0011667210	16218	41.37562	73.46840	26.52910	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	-0.0004827830	0.22940	0.0004827830	28546	72.82700	94.61764	5.38133	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	0.0008861660	0.49290	0.0008861660	20678	52.75404	83.22189	16.77622	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20440	-0.0018326760	0.24330	0.0018326760	8477	21.62666	49.08108	50.91501	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	-0.0013085690	0.06440	0.0013085690	14262	36.38544	68.30260	31.69460	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53870	0.0011053610	0.53810	0.0011053610	17134	43.71253	75.69399	24.30364	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0004359350	0.03310	0.0004359350	29496	75.25066	95.54983	4.44924	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	-0.0015969930	0.66280	0.0015969930	10828	27.62456	57.66611	42.33048	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	0.0014916130	0.84210	0.0014916130	12009	30.63755	61.56485	38.43196	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58810	0.0002167840	0.58320	0.0002167840	34247	87.37148	98.85306	1.14647	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23830	0.0033534530	0.20890	0.0033534530	1497	3.81917	13.28125	86.71159	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	-0.0007708530	0.23860	0.0007708530	22832	58.24936	87.03469	12.96366	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik