SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43680	-0.0009970500	0.43950	0.0009970500	18704	47.80819	79.39151	20.60635	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	0.0000299710	0.08420	0.0000299710	38445	98.26700	99.97747	0.02247	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75320	0.0004461350	0.74480	0.0004461350	29123	74.43959	95.28123	4.71781	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	0.0009350180	0.82370	0.0009350180	19649	50.22365	81.35449	18.64349	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0004007100	0.23420	0.0004007100	30107	76.95473	96.17774	3.82140	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	0.0007811270	0.49450	0.0007811270	22437	57.34990	86.50002	13.49830	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20350	-0.0014946950	0.24120	0.0014946950	11842	30.26864	61.18849	38.80829	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	-0.0009265760	0.06370	0.0009265760	19802	50.61473	81.66123	18.33677	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53610	0.0012478340	0.53470	0.0012478340	14977	38.28183	70.40754	29.58977	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0007241650	0.03290	0.0007241650	23519	60.11553	88.25433	11.74411	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	-0.0013047430	0.65530	0.0013047430	14173	36.22677	68.19738	31.79981	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	0.0009348630	0.84360	0.0009348630	19653	50.23388	81.36255	18.63544	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	0.0001360980	0.58490	0.0001360980	35950	91.88968	99.53216	0.46755	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0034464380	0.21070	0.0034464380	1314	3.35864	12.01379	87.97879	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25670	-0.0009038290	0.23250	0.0009038290	20203	51.63970	82.45134	17.54671	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik