SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	0.0000317780	0.23790	0.0000317780	42195	98.32914	99.98105	0.01889	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0053117580	0.59330	0.0053117580	463	1.07895	5.03796	94.95307	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0012722900	0.62370	0.0012722900	18272	42.58016	75.53476	24.46309	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0019565180	0.22730	0.0019565180	10513	24.49897	54.72064	45.27606	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0023193550	0.63580	0.0023193550	7749	18.05789	44.78528	55.21081	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0002060100	0.40280	0.0002060100	38242	89.11726	99.18293	0.81672	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0022884370	0.32250	0.0022884370	7964	18.55891	45.62177	54.37437	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0005385690	0.57560	0.0005385690	31131	72.54614	94.73745	5.26165	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0006478280	0.56920	0.0006478280	28988	67.55220	92.58970	7.40920	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0010044180	0.40400	0.0010044180	22419	52.24413	83.47630	16.52200	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0004018780	0.20290	0.0004018780	33981	79.18764	96.99659	3.00273	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0002869370	0.25290	0.0002869370	36473	84.99487	98.44505	1.55446	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0013216150	0.50880	0.0013216150	17596	41.00485	74.05589	25.94188	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0004324190	0.26050	0.0004324190	33313	77.63097	96.52629	3.47298	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0028366260	0.48180	0.0028366260	4995	11.64010	32.87888	67.11633	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik