SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43680	-0.0001584590	0.43950	0.0001584590	35162	89.87552	99.28136	0.71827	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06030	0.0008971170	0.08420	0.0008971170	19146	48.93796	80.32448	19.67343	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75320	0.0003496100	0.74480	0.0003496100	30544	78.07172	96.55898	3.44021	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80200	0.0015447580	0.82370	0.0015447580	9915	25.34315	54.64445	45.35196	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20470	-0.0006869890	0.23420	0.0006869890	23206	59.31549	87.77821	12.22019	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53370	0.0006258890	0.49450	0.0006258890	24460	62.52077	89.69229	10.30625	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20350	-0.0004158430	0.24120	0.0004158430	29003	74.13286	95.18633	4.81271	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06380	-0.0010526410	0.06370	0.0010526410	16545	42.28970	74.42773	25.56981	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53610	0.0007947490	0.53470	0.0007947490	21005	53.68965	83.98427	16.01388	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02580	0.0004861100	0.03290	0.0004861100	27471	70.21701	93.58125	6.41762	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68530	-0.0022574740	0.65530	0.0022574740	4276	10.92963	30.20896	69.78578	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82760	0.0032865770	0.84360	0.0032865770	1132	2.89344	10.65573	89.33661	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58720	0.0025694980	0.58490	0.0025694980	2896	7.40230	22.47109	77.52293	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24040	0.0018553670	0.21070	0.0018553670	6970	17.81561	43.02429	56.97139	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25670	0.0004000650	0.23250	0.0004000650	29348	75.01470	95.51402	4.48505	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik