SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0001382240	0.23790	0.0001382240	40050	93.33054	99.69670	0.30309	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0014830440	0.59330	0.0014830440	17757	41.38003	74.73994	25.25784	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0030093460	0.62370	0.0030093460	5754	13.40884	36.53869	63.45680	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0050968980	0.22730	0.0050968980	1000	2.33035	9.61109	90.38128	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0009794680	0.63580	0.0009794680	24534	57.17282	87.16525	12.83328	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0012861690	0.40280	0.0012861690	20259	47.21057	79.91887	20.07921	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0025068270	0.32250	0.0025068270	8519	19.85226	47.89737	52.09887	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0022100250	0.57560	0.0022100250	10580	24.65511	55.14977	44.84692	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0007427770	0.56920	0.0007427770	28424	66.23788	92.15447	7.84442	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0007711940	0.40400	0.0007711940	27907	65.03309	91.56860	8.43025	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0007812630	0.20290	0.0007812630	27728	64.61596	91.36044	8.63839	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0024927940	0.25290	0.0024927940	8585	20.00606	48.14454	51.85173	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0010198360	0.50880	0.0010198360	23948	55.80723	86.28821	13.71026	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0014395450	0.26050	0.0014395450	18276	42.58949	75.87647	24.12137	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0052035220	0.48180	0.0052035220	905	2.10897	8.87789	91.11432	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik