SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0007581240	0.23790	0.0007581240	28222	65.76715	91.87642	8.12243	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0008353820	0.59330	0.0008353820	26855	62.58156	90.22269	9.77604	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0025043130	0.62370	0.0025043130	8285	19.30695	46.89023	53.10596	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0023643340	0.22730	0.0023643340	9214	21.47185	50.32711	49.66930	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0008266670	0.63580	0.0008266670	27005	62.93111	90.41221	9.58653	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0003351400	0.40280	0.0003351400	35991	83.87164	98.24109	1.75840	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0021249140	0.32250	0.0021249140	10985	25.59890	56.36042	43.63635	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0018149590	0.57560	0.0018149590	13807	32.17515	64.79006	35.20719	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0029543240	0.56920	0.0029543240	5764	13.43214	36.47697	63.51854	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0018360210	0.40400	0.0018360210	13590	31.66946	64.18823	35.80897	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0004045700	0.20290	0.0004045700	34568	80.55556	97.44071	2.55868	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0003418860	0.25290	0.0003418860	35834	83.50578	98.16022	1.83926	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0019156530	0.50880	0.0019156530	12827	29.89141	62.01138	37.98570	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0003878670	0.26050	0.0003878670	34922	81.38050	97.65392	2.34549	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0019349780	0.48180	0.0019349780	12648	29.47427	61.48756	38.50949	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik