SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0006328590	0.24010	0.0006328590	30255	71.01946	94.22128	5.77777	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	0.0008516520	0.59060	0.0008516520	26561	62.34830	90.09412	9.90459	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	0.0027644460	0.61470	0.0027644460	6906	16.21089	41.58513	58.41070	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0022538850	0.22680	0.0022538850	10122	23.76001	53.71084	46.28576	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0010801750	0.63530	0.0010801750	23050	54.10671	84.97280	15.02557	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0000419000	0.40660	0.0000419000	41791	98.09864	99.97483	0.02511	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	-0.0020793140	0.32370	0.0020793140	11540	27.08857	58.34503	41.65183	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	-0.0018927460	0.57630	0.0018927460	13227	31.04857	63.40012	36.59702	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	0.0028687840	0.57070	0.0028687840	6353	14.91280	39.23409	60.76158	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0020490470	0.40550	0.0020490470	11814	27.73174	59.19921	40.79770	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	0.0003159900	0.20260	0.0003159900	36274	85.14824	98.50167	1.49785	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0001515750	0.25140	0.0001515750	39527	92.78421	99.64806	0.35171	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	0.0021207590	0.50840	0.0021207590	11191	26.26934	57.23834	42.75846	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	-0.0003166730	0.25930	0.0003166730	36263	85.12241	98.49641	1.50311	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	0.0014596030	0.47940	0.0014596030	17910	42.04127	75.20090	24.79690	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik