SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0005969420	0.23640	0.0005969420	31059	72.37836	94.79393	5.20516	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0006946800	0.59520	0.0006946800	29231	68.11848	92.99749	7.00145	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0025023500	0.61180	0.0025023500	8281	19.29763	46.86867	53.12752	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0024144390	0.22770	0.0024144390	8859	20.64457	49.02894	50.96739	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0010992770	0.63230	0.0010992770	22703	52.90595	84.16907	15.82926	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0000619730	0.40350	0.0000619730	41589	96.91695	99.93783	0.06208	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0022478800	0.32560	0.0022478800	10022	23.35477	53.14336	46.85322	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0017974420	0.57680	0.0017974420	14004	32.63423	65.33213	34.66513	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0027833600	0.56780	0.0027833600	6653	15.50382	40.34396	59.65181	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0018858090	0.40800	0.0018858090	13135	30.60915	62.89915	37.09798	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0005935370	0.20270	0.0005935370	31124	72.52983	94.85275	5.14634	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0002208710	0.25200	0.0002208710	38291	89.23145	99.23251	0.76716	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0022981480	0.50700	0.0022981480	9629	22.43894	51.78522	48.21129	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0002744700	0.25970	0.0002744700	37168	86.61447	98.80928	1.19030	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0018503780	0.47910	0.0018503780	13477	31.40613	63.87133	36.12586	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik