SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18220	-0.0005130240	0.24010	0.0005130240	31213	73.26823	95.11073	4.88839	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.56030	-0.0009108920	0.59060	0.0009108920	23673	55.56912	85.96209	14.03635	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60310	-0.0009879380	0.61470	0.0009879380	22377	52.52694	83.85263	16.14567	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21480	0.0005296690	0.22680	0.0005296690	30879	72.48421	94.81211	5.18699	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58840	0.0037582610	0.63530	0.0037582610	2066	4.84965	16.75108	83.24248	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0000701920	0.40660	0.0000701920	40946	96.11511	99.90015	0.09973	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25790	0.0009042440	0.32370	0.0009042440	23783	55.82733	86.13328	13.86517	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54740	0.0009074380	0.57630	0.0009074380	23725	55.69118	86.04316	13.95528	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56830	-0.0003144020	0.57070	0.0003144020	35436	83.18115	98.08725	1.91221	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0009621940	0.40550	0.0009621940	22807	53.53630	84.57135	15.42700	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12190	-0.0006561680	0.20260	0.0006561680	28433	66.74256	92.32299	7.67589	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24900	0.0029630850	0.25140	0.0029630850	4337	10.18051	29.63247	70.36244	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54510	-0.0020885310	0.50840	0.0020885310	9344	21.93376	50.93240	49.06402	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24590	-0.0004837000	0.25930	0.0004837000	31796	74.63675	95.60883	4.39034	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43580	-0.0012828980	0.47940	0.0012828980	17948	42.13047	75.25139	24.74641	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik