SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0011098630	0.23640	0.0011098630	21148	49.28225	81.39433	18.60385	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0009433230	0.59520	0.0009433230	23854	55.58818	85.95462	14.04383	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0015039470	0.61180	0.0015039470	15812	36.84750	69.96926	30.02826	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0000841540	0.22770	0.0000841540	41048	95.65623	99.87192	0.12794	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0044939590	0.63230	0.0044939590	1126	2.62397	10.35008	89.64253	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0016123870	0.40350	0.0016123870	14563	33.93689	66.76969	33.22766	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0002274590	0.32560	0.0002274590	37875	88.26202	99.06224	0.93739	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0018870160	0.57680	0.0018870160	11755	27.39327	58.71058	41.28631	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0006126410	0.56780	0.0006126410	29821	69.49338	93.55378	6.44521	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0000283630	0.40800	0.0000283630	42265	98.49226	99.98464	0.01532	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0005119960	0.20270	0.0005119960	31795	74.09349	95.38017	4.61898	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0028770100	0.25200	0.0028770100	5092	11.86614	33.28255	66.71272	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0000206810	0.50700	0.0000206810	42454	98.93270	99.99231	0.00765	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0002372440	0.25970	0.0002372440	37652	87.74236	98.97711	1.02250	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	-0.0008460040	0.47910	0.0008460040	25493	59.40762	88.36392	11.63469	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik