SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0008339710	0.23640	0.0008339710	26226	61.11577	89.37720	10.62147	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0021356160	0.59520	0.0021356160	10245	23.87444	53.80958	46.18703	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0010944030	0.61180	0.0010944030	21970	51.19780	82.88893	17.10933	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0025225890	0.22760	0.0025225890	7517	17.51724	43.76247	56.23352	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0015844090	0.63230	0.0015844090	15571	36.28589	69.39717	30.60031	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0007445530	0.40350	0.0007445530	27829	64.85132	91.38076	8.61806	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0016361450	0.32560	0.0016361450	15001	34.95759	67.94136	32.05604	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0003635580	0.57680	0.0003635580	35168	81.95377	97.78772	2.21171	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0000219640	0.56780	0.0000219640	42419	98.85114	99.99148	0.00849	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0024829300	0.40800	0.0024829300	7763	18.09051	44.73973	55.25634	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0000012870	0.20270	0.0000012870	42885	99.93708	99.99997	0.00003	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0007288290	0.25200	0.0007288290	28114	65.51547	91.71389	8.28495	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0000248080	0.50700	0.0000248080	42347	98.68335	99.98880	0.01116	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0009866440	0.25970	0.0009866440	23649	55.11046	85.65934	14.33909	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0000163600	0.47900	0.0000163600	42543	99.14010	99.99524	0.00474	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik