SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0010069940	0.23790	0.0010069940	23373	54.46728	85.23287	14.76554	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0020435980	0.59330	0.0020435980	10962	25.54530	56.16019	43.83657	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0016188210	0.62370	0.0016188210	15238	35.50988	68.52259	31.47485	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0022719160	0.22730	0.0022719160	9190	21.41592	50.10945	49.88694	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0018110100	0.63580	0.0018110100	13203	30.76762	62.99626	37.00087	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0009042910	0.40280	0.0009042910	25047	58.36829	87.76903	12.22954	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0015354090	0.32240	0.0015354090	16208	37.77032	70.94595	29.05162	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0000805840	0.57560	0.0000805840	41121	95.82634	99.88623	0.11365	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0000888300	0.56920	0.0000888300	40914	95.34396	99.85838	0.14148	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0021508510	0.40400	0.0021508510	10097	23.52955	53.28687	46.70972	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0000218270	0.20280	0.0000218270	42415	98.84182	99.99142	0.00855	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0007920290	0.25290	0.0007920290	26989	62.89383	90.37864	9.62010	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0000611850	0.50880	0.0000611850	41559	96.84704	99.93562	0.06428	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0009339170	0.26050	0.0009339170	24560	57.23341	87.05943	12.93909	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	-0.0000093640	0.48180	0.0000093640	42695	99.49431	99.99831	0.00168	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik