SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0018998100	0.23790	0.0018998100	11733	27.34200	58.74211	41.25480	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0011954370	0.59330	0.0011954370	20170	47.00317	79.63135	20.36671	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0029766280	0.62370	0.0029766280	4862	11.33016	32.34123	67.65394	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0021620820	0.22730	0.0021620820	9494	22.12435	51.36936	48.62713	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0017463050	0.63580	0.0017463050	13270	30.92375	63.28928	36.70789	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0001454730	0.40280	0.0001454730	39711	92.54055	99.62176	0.37800	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0008075010	0.32250	0.0008075010	26245	61.16005	89.45114	10.54755	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0014362900	0.57560	0.0014362900	16915	39.41788	72.68943	27.30824	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	-0.0008704010	0.56920	0.0008704010	25185	58.68988	88.00637	11.99222	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0016559430	0.40400	0.0016559430	14263	33.23779	66.03536	33.96195	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0002104320	0.20290	0.0002104320	38275	89.19416	99.20772	0.79193	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0001760990	0.25290	0.0001760990	39008	90.90231	99.43789	0.56182	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0000071190	0.50880	0.0000071190	42755	99.63413	99.99907	0.00092	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0007659030	0.26050	0.0007659030	27021	62.96840	90.44166	9.55710	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0005379050	0.48180	0.0005379050	31438	73.26156	95.10495	4.89417	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik