SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0017589690	0.23640	0.0017589690	13094	30.51361	62.79225	37.20489	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0012181770	0.59520	0.0012181770	19885	46.33902	79.06594	20.93208	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0026291590	0.61180	0.0026291590	6515	15.18223	39.85576	60.13997	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0023690740	0.22770	0.0023690740	8033	18.71971	46.00965	53.98650	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0016948000	0.63230	0.0016948000	13808	32.17748	64.79530	35.20195	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0002006090	0.40350	0.0002006090	38499	89.71616	99.27292	0.72676	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0009155370	0.32560	0.0009155370	24422	56.91182	86.90600	13.09251	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0009407480	0.57680	0.0009407480	24016	55.96570	86.29405	13.70442	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	-0.0011682010	0.56780	0.0011682010	20596	47.99590	80.44370	19.55440	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	-0.0020104760	0.40800	0.0020104760	10711	24.96038	55.51433	44.48240	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0002480930	0.20270	0.0002480930	37419	87.19938	98.87945	1.12015	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0002709370	0.25200	0.0002709370	36910	86.01324	98.66455	1.33501	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0002169660	0.50700	0.0002169660	38120	88.83296	99.14443	0.85522	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0009682930	0.25970	0.0009682930	23612	55.02424	85.66756	14.33087	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0007148800	0.47910	0.0007148800	27922	65.06805	91.53400	8.46484	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik