SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44040	0.0010799120	0.44530	0.0010799120	17852	45.54430	77.36971	22.62804	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05840	0.0004524950	0.07810	0.0004524950	29398	75.00064	95.39017	4.60889	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.74540	0.0020087080	0.72360	0.0020087080	7332	18.70551	44.87665	55.11918	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80790	0.0009151970	0.82660	0.0009151970	20574	52.48871	83.00540	16.99270	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20430	0.0016971960	0.22790	0.0016971960	10013	25.54532	55.14432	44.85216	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.54020	0.0042710490	0.51070	0.0042710490	551	1.40572	6.68481	93.30633	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20410	-0.0010410870	0.25460	0.0010410870	18485	47.15922	78.76345	21.23439	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06210	0.0015247990	0.06470	0.0015247990	11826	30.17068	61.19453	38.80231	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.52870	0.0027614580	0.52780	0.0027614580	3182	8.11797	24.73672	75.25755	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02670	0.0011086310	0.03720	0.0011086310	17469	44.56719	76.50037	23.49733	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68490	0.0009662120	0.66450	0.0009662120	19739	50.35845	81.37338	18.62462	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82520	0.0008047610	0.83500	0.0008047610	22554	57.54012	86.53373	13.46460	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58540	0.0021028990	0.57630	0.0021028990	6647	16.95793	41.95714	58.03849	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23090	0.0032113780	0.20880	0.0032113780	1895	4.83455	16.80496	83.18838	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25320	0.0018994690	0.24320	0.0018994690	8198	20.91487	48.38973	51.60633	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik