SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44030	0.0032367960	0.44510	0.0032367960	2630	6.70970	20.99139	79.00242	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05850	0.0015739030	0.07780	0.0015739030	12984	33.12498	64.87869	35.11830	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.74530	0.0016619630	0.72370	0.0016619630	12081	30.82124	62.08606	37.91076	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80790	-0.0012439390	0.82680	0.0012439390	17048	43.49312	75.77031	24.22731	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20430	-0.0008311770	0.22760	0.0008311770	23103	58.94074	87.70486	12.29356	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.54030	-0.0033234730	0.51080	0.0033234730	2404	6.13312	19.57328	80.42036	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20410	-0.0003461070	0.25430	0.0003461070	32042	81.74605	97.66724	2.33210	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06210	-0.0004478270	0.06470	0.0004478270	30080	76.74057	96.17816	3.82099	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.52880	-0.0008270290	0.52750	0.0008270290	23180	59.13718	87.82688	12.17154	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02670	0.0013425670	0.03710	0.0013425670	15716	40.09491	72.47631	27.52112	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68490	-0.0002099780	0.66500	0.0002099780	34769	88.70322	99.11238	0.88722	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82520	0.0008280770	0.83520	0.0008280770	23160	59.08615	87.79525	12.20317	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58540	-0.0002776120	0.57660	0.0002776120	33433	85.29479	98.49481	1.50466	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23080	0.0000497190	0.20850	0.0000497190	38137	97.29571	99.94806	0.05185	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25330	0.0000591480	0.24310	0.0000591480	37950	96.81863	99.92860	0.07128	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik