SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0029685920	0.23640	0.0029685920	6762	15.75783	40.69670	59.29912	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0068544980	0.59520	0.0068544980	348	0.81096	4.03475	95.95560	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	0.0006006140	0.61180	0.0006006140	31868	74.26361	95.38147	4.61769	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0016671740	0.22770	0.0016671740	16723	38.97045	72.02584	27.97181	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0018646060	0.63230	0.0018646060	14630	34.09303	66.83114	33.16624	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0013082780	0.40350	0.0013082780	20987	48.90707	80.91449	19.08367	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0017720710	0.32560	0.0017720710	15567	36.27657	69.22835	30.76916	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0008436670	0.57680	0.0008436670	27932	65.09135	91.39161	8.60720	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0014751200	0.56780	0.0014751200	18883	44.00401	76.79498	23.20295	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0009997830	0.40800	0.0009997830	25540	59.51715	88.28785	11.71074	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0010530890	0.20270	0.0010530890	24731	57.63190	87.11864	12.87988	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	0.0003884710	0.25200	0.0003884710	35691	83.17254	98.03496	1.96449	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0002344640	0.50700	0.0002344640	38533	89.79540	99.27913	0.72054	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0017839350	0.25970	0.0017839350	15449	36.00158	68.93301	31.06448	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0001926410	0.47910	0.0001926410	39325	91.64103	99.51799	0.48174	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik