SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0029907850	0.23790	0.0029907850	6551	15.26613	39.83599	60.15979	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0064598080	0.59330	0.0064598080	462	1.07662	5.09509	94.89579	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	0.0004090090	0.62370	0.0004090090	35273	82.19845	97.81844	2.18098	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0018143020	0.22730	0.0018143020	15087	35.15800	68.06861	31.92883	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0021424550	0.63580	0.0021424550	12158	28.33240	59.91588	40.08110	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0019166430	0.40280	0.0019166430	14078	32.80667	65.41207	34.58523	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0016599410	0.32250	0.0016599410	16710	38.94016	72.04407	27.95359	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0007126490	0.57560	0.0007126490	30001	69.91284	93.66038	6.33861	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0016752310	0.56920	0.0016752310	16532	38.52535	71.62516	28.37247	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0007845230	0.40400	0.0007845230	28799	67.11176	92.39110	7.60779	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0008419230	0.20290	0.0008419230	27853	64.90725	91.30631	8.69250	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	0.0003299890	0.25290	0.0003299890	36724	85.57979	98.57263	1.42690	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	0.0002497880	0.50880	0.0002497880	38200	89.01939	99.17467	0.82498	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0018836490	0.26050	0.0018836490	14417	33.59666	66.32093	33.67641	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0002802520	0.48180	0.0002802520	37618	87.66312	98.95735	1.04226	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik