SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.44020	0.0025762180	0.44040	0.0025762180	4434	11.35700	31.03088	68.96394	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05510	0.0009846250	0.07710	0.0009846250	20011	51.25506	81.98914	18.00889	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.73920	0.0013220690	0.72070	0.0013220690	15131	38.75570	70.72770	29.26964	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80380	-0.0017565560	0.82720	0.0017565560	10148	25.99252	55.40590	44.59057	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20450	-0.0006648860	0.23010	0.0006648860	25579	65.51662	91.15763	8.84104	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.54270	-0.0030229530	0.51350	0.0030229530	2743	7.02577	21.58221	78.41172	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	-0.0000557220	0.25150	0.0000557220	37856	96.96225	99.93222	0.06767	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06310	-0.0001620120	0.06510	0.0001620120	35643	91.29399	99.45097	0.54870	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.52230	-0.0002603860	0.51680	0.0002603860	33640	86.16362	98.60359	1.39589	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02860	0.0014464640	0.03780	0.0014464640	13557	34.72414	66.34831	33.64879	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.69020	-0.0004994540	0.66260	0.0004994540	28784	73.72573	94.89604	5.10296	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82380	0.0000918150	0.83710	0.0000918150	37091	95.00282	99.81822	0.18159	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58370	-0.0000176080	0.56910	0.0000176080	38685	99.08560	99.99364	0.00632	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23430	-0.0000408690	0.20720	0.0000408690	38192	97.82286	99.96503	0.03489	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25220	-0.0002741900	0.23590	0.0002741900	33351	85.42339	98.44860	1.55085	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik