SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0001931180	0.23790	0.0001931180	38538	89.80705	99.30325	0.69643	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0009210510	0.59330	0.0009210510	24119	56.20572	86.22753	13.77093	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0012340600	0.62370	0.0012340600	19166	44.66350	77.34622	22.65171	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0006942770	0.22730	0.0006942770	28221	65.76482	91.75283	8.24601	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	0.0002333860	0.63580	0.0002333860	37676	87.79828	98.99587	1.00374	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	-0.0012502980	0.40280	0.0012502980	18939	44.13451	76.87441	23.12350	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	0.0008281310	0.32250	0.0008281310	25705	59.90166	88.54959	11.44903	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0010347950	0.57560	0.0010347950	22193	51.71747	83.08010	16.91816	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0000957290	0.56920	0.0000957290	40680	94.79866	99.81976	0.18008	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	-0.0000373240	0.40400	0.0000373240	42049	97.98891	99.97348	0.02645	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0009834760	0.20290	0.0009834760	23028	53.66331	84.48917	15.50919	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0020051340	0.25290	0.0020051340	10281	23.95833	53.77385	46.22280	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0000227230	0.50880	0.0000227230	42368	98.73229	99.98954	0.01042	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0015269140	0.26050	0.0015269140	15241	35.51687	68.32183	31.67562	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	-0.0039520040	0.48180	0.0039520040	1733	4.03850	14.76582	85.22757	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik