SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0001165140	0.23640	0.0001165140	40294	93.89914	99.74882	0.25098	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	-0.0011738990	0.59520	0.0011738990	20138	46.92860	79.30983	20.68822	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0007192200	0.61180	0.0007192200	27851	64.90259	91.29625	8.70256	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0006929450	0.22770	0.0006929450	28373	66.11903	91.90749	8.09136	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	0.0003861950	0.63230	0.0003861950	34449	80.27824	97.31609	2.68327	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	-0.0016096510	0.40350	0.0016096510	14370	33.48714	66.06785	33.92948	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	0.0010368820	0.32560	0.0010368820	22239	51.82466	83.16532	16.83296	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	-0.0011284020	0.57680	0.0011284020	20825	48.52955	80.62413	19.37400	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0001401370	0.56780	0.0001401370	39777	92.69435	99.63862	0.36114	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0000675280	0.40800	0.0000675280	41388	96.44855	99.91465	0.08524	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0007251870	0.20270	0.0007251870	27730	64.62062	91.15117	8.84762	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0019315380	0.25200	0.0019315380	11043	25.73406	56.31798	43.67881	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0000510750	0.50700	0.0000510750	41753	97.29912	99.95046	0.04946	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0014463620	0.25970	0.0014463620	16334	38.06394	71.04590	28.95169	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	-0.0039407680	0.47910	0.0039407680	1821	4.24357	15.39775	84.59571	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik