SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43770	-0.0004903140	0.44410	0.0004903140	28947	73.85004	95.28712	4.71193	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06150	-0.0004892550	0.08370	0.0004892550	28963	73.89086	95.30226	4.69679	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75720	0.0033145430	0.74550	0.0033145430	2365	6.03363	19.10532	80.88828	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80380	-0.0016401530	0.82080	0.0016401530	12192	31.10442	62.65170	37.34513	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	-0.0009440480	0.23000	0.0009440480	21113	53.86382	84.51581	15.48237	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53230	-0.0009342430	0.48930	0.0009342430	21270	54.26436	84.80046	15.19774	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20420	-0.0006846000	0.24190	0.0006846000	25452	64.93354	91.32916	8.66952	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06330	0.0001579260	0.06460	0.0001579260	35721	91.13197	99.46996	0.52974	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53910	0.0000860760	0.53990	0.0000860760	37321	95.21392	99.84656	0.15327	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0006255170	0.03320	0.0006255170	26473	67.53833	92.62154	7.37726	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68360	0.0013018300	0.66280	0.0013018300	16113	41.10774	73.74897	26.24852	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82850	-0.0027532360	0.84110	0.0027532360	4297	10.96257	30.34816	69.64653	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58840	0.0001819180	0.58390	0.0001819180	35195	89.79003	99.29729	0.70236	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23870	0.0010114410	0.21070	0.0010114410	20051	51.15443	82.50979	17.48825	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25960	0.0023357230	0.23840	0.0023357230	6485	16.54463	41.06089	58.93460	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik