SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	-0.0008314320	0.23790	0.0008314320	25137	58.57802	87.96160	12.03700	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	-0.0000703700	0.59330	0.0000703700	41240	96.10365	99.89971	0.10017	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0009299080	0.62370	0.0009299080	23473	54.70032	85.48378	14.51464	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	-0.0004326080	0.22730	0.0004326080	33079	77.08566	96.42376	3.57551	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0003159750	0.63580	0.0003159750	35734	83.27274	98.10499	1.89447	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0030123200	0.40280	0.0030123200	4192	9.76883	29.33243	70.66247	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0036938770	0.32250	0.0036938770	2297	5.35282	18.68479	81.30895	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	0.0012575360	0.57560	0.0012575360	18365	42.79689	76.07711	23.92076	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0026195740	0.56920	0.0026195740	5890	13.72576	37.41265	62.58291	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0017106620	0.40400	0.0017106620	12877	30.00792	62.39089	37.60621	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	-0.0004087980	0.20290	0.0004087980	33615	78.33473	96.80593	3.19337	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0002657670	0.25290	0.0002657670	36849	85.87109	98.65472	1.34483	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0000499400	0.50880	0.0000499400	41730	97.24553	99.94965	0.05027	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	-0.0005674400	0.26050	0.0005674400	30295	70.59797	94.06818	5.93086	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0011335470	0.48180	0.0011335470	20149	46.95423	79.68672	20.31136	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik