SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	-0.0013633880	0.43440	0.0013633880	14272	36.55550	68.30596	31.69122	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05800	0.0014012810	0.08240	0.0014012810	13779	35.29276	66.89919	33.09791	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75150	0.0034667970	0.74520	0.0034667970	1454	3.72419	12.69623	87.29662	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79940	0.0035105260	0.82160	0.0035105260	1382	3.53978	12.17793	87.81483	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20420	-0.0002126250	0.23430	0.0002126250	34468	88.28441	98.99570	1.00386	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53530	0.0028531040	0.49410	0.0028531040	3082	7.89406	23.19828	76.79583	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	0.0019095770	0.23800	0.0019095770	8522	21.82778	49.12989	50.86617	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06430	-0.0011172450	0.06390	0.0011172450	17653	45.21541	76.93345	23.06425	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53200	-0.0021702370	0.53000	0.0021702370	6465	16.55909	40.49651	59.49901	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	0.0001389100	0.03470	0.0001389100	36031	92.28779	99.56230	0.43742	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68940	0.0013617020	0.66060	0.0013617020	14282	36.58112	68.33410	31.66309	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82730	0.0000540980	0.84350	0.0000540980	37899	97.07238	99.93596	0.06392	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58690	0.0030050080	0.58270	0.0030050080	2570	6.58265	20.10088	79.89292	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24340	-0.0011904010	0.21020	0.0011904010	16547	42.38256	74.29746	25.70008	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25900	0.0016145800	0.23170	0.0016145800	11291	28.92014	59.16462	40.83205	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik