SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	-0.0007415630	0.23640	0.0007415630	26923	62.74003	90.33020	9.66855	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0000143230	0.59520	0.0000143230	42561	99.18205	99.99576	0.00422	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0008677960	0.61180	0.0008677960	24632	57.40119	87.22478	12.77375	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	-0.0003859040	0.22770	0.0003859040	34192	79.67934	97.17449	2.82486	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0004193460	0.63230	0.0004193460	33440	77.92692	96.66470	3.33459	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0029695020	0.40350	0.0029695020	4421	10.30248	30.47387	69.52113	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0038055470	0.32560	0.0038055470	2075	4.83548	17.28227	82.71133	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0013298090	0.57680	0.0013298090	17461	40.69025	74.08987	25.90789	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0024743420	0.56780	0.0024743420	6780	15.79978	41.23876	58.75708	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0018507810	0.40800	0.0018507810	11550	26.91555	58.39477	41.60211	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	-0.0003268360	0.20270	0.0003268360	35549	82.84163	97.98978	2.00967	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0002860200	0.25200	0.0002860200	36450	84.94128	98.45373	1.54579	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0002568800	0.50700	0.0002568800	37106	86.46999	98.75414	1.24543	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	-0.0006071980	0.25970	0.0006071980	29553	68.86885	93.32090	6.67808	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0006475910	0.47910	0.0006475910	28782	67.07215	92.50607	7.49284	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik