SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	-0.0016030650	0.43330	0.0016030650	6405	16.40541	40.14731	59.84819	rs29026456
BTA-07775-no-rs	1	38649369	785	0.05800	0.0008283070	0.08200	0.0008283070	17562	44.98233	76.58610	23.41158	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75130	-0.0001121470	0.74500	0.0001121470	35749	91.56549	99.47042	0.52927	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.79890	0.0008907670	0.82150	0.0008907670	16340	41.85236	73.63731	26.36020	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20370	0.0009998800	0.23300	0.0009998800	14356	36.77066	68.37990	31.61729	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53510	0.0021665880	0.49330	0.0021665880	2756	7.05906	21.17663	78.81729	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20150	0.0016784440	0.23930	0.0016784440	5796	14.84555	37.34501	62.65028	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06440	-0.0010414930	0.06400	0.0010414930	13616	34.87526	66.26016	33.73692	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53140	-0.0014847840	0.52610	0.0014847840	7499	19.20752	44.88263	55.11321	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02640	0.0000646970	0.03460	0.0000646970	37196	95.27176	99.83031	0.16951	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68960	0.0011878370	0.66050	0.0011878370	11244	28.79975	58.84840	41.14827	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82690	0.0005031050	0.84390	0.0005031050	25014	64.06946	90.34827	9.65032	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58710	0.0024266990	0.58260	0.0024266990	1803	4.61810	15.05577	84.93742	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.24290	-0.0004586550	0.20940	0.0004586550	26195	67.09441	91.94115	8.05757	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25840	0.0015790700	0.23050	0.0015790700	6620	16.95610	41.10699	58.88858	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik