SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18280	0.0006383450	0.23640	0.0006383450	30172	70.31133	93.91822	6.08079	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55740	0.0000835900	0.59520	0.0000835900	41105	95.78906	99.88227	0.11760	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60810	-0.0037169550	0.61180	0.0037169550	2869	6.68578	22.07063	77.92361	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21240	0.0003458670	0.22770	0.0003458670	35664	83.10962	98.08580	1.91366	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.58920	-0.0007203090	0.63230	0.0007203090	28639	66.73891	92.30625	7.69264	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47350	0.0036398190	0.40350	0.0036398190	3056	7.12155	23.13607	76.85830	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25890	-0.0012385100	0.32560	0.0012385100	20279	47.25718	79.76520	20.23288	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54720	0.0000985180	0.57680	0.0000985180	40785	95.04334	99.83719	0.16266	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56570	0.0036005720	0.56780	0.0036005720	3179	7.40818	23.82592	76.16850	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37030	0.0006030070	0.40800	0.0006030070	30776	71.71887	94.49845	5.50061	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12150	0.0003977940	0.20270	0.0003977940	34657	80.76296	97.50527	2.49411	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24760	-0.0030405710	0.25200	0.0030405710	5132	11.95936	33.80629	66.18900	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54530	0.0001750110	0.50700	0.0001750110	39169	91.27750	99.49321	0.50652	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24440	0.0007884340	0.25970	0.0007884340	27401	63.85393	90.86109	9.13769	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43530	0.0005957790	0.47910	0.0005957790	30894	71.99385	94.60799	5.39109	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik