SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.43760	-0.0013782040	0.44260	0.0013782040	8423	21.48889	48.42329	51.57278	rs29026456
BTA-07775-no-rs	1	38649369	785	0.06190	0.0007494450	0.08420	0.0007494450	18944	48.33023	79.47627	20.52159	rs29027438
Hapmap57645-rs29027916	1	150363389	3291	0.75710	-0.0000193610	0.74440	0.0000193610	38633	98.56111	99.98419	0.01575	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.80390	0.0008577730	0.82200	0.0008577730	16646	42.46754	74.20754	25.79001	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.20340	0.0010629950	0.22950	0.0010629950	12970	33.08927	64.14783	35.84913	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.53270	0.0023177050	0.49300	0.0023177050	1996	5.09223	16.23748	83.75589	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.20440	0.0012879190	0.24330	0.0012879190	9538	24.33349	52.66737	47.32895	rs29025422
BTA-17925-no-rs	1	92856829	1981	0.06320	-0.0010452000	0.06440	0.0010452000	13270	33.85463	65.05184	34.94518	rs41575292
Hapmap40403-BTA-15429	1	66230091	1403	0.53880	-0.0013769230	0.53820	0.0013769230	8436	21.52206	48.47445	51.52162	rs41575648
Hapmap40301-BTA-119986	1	95029947	2021	0.02410	0.0003365170	0.03310	0.0003365170	29300	74.75062	95.26210	4.73694	rs41571526
Hapmap39970-BTA-117984	1	38863022	789	0.68350	0.0011215310	0.66280	0.0011215310	12002	30.61969	61.12581	38.87098	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.82860	0.0006455200	0.84210	0.0006455200	21277	54.28222	84.12162	15.87654	rs41585816
UA-IFASA-9174	1	64592861	1363	0.58820	0.0025086950	0.58340	0.0025086950	1403	3.57936	12.15299	87.83985	rs41593713
BTA-98511-no-rs	1	117929353	2516	0.23840	-0.0004341200	0.20900	0.0004341200	26604	67.87254	92.29997	7.69879	rs41594021
Hapmap50536-BTA-99808	1	125641702	2687	0.25940	0.0016911370	0.23860	0.0016911370	5392	13.75615	35.22779	64.76738	rs41596878

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik