SNP formula

Ocena plemenskih vrednosti GOVEDO

Natisni Prijava

Domov>Učinek SNP - Lastnost

Koda obračuna

Izberi lastnost


Rezultati se bodo izpisali za izbrano lastnost. Prednastavljena je lastnost 'količina mleka kg'. Lahko izbiraš med vsemi lastnostmi s katerimi sodelujemo v mednarodnem genomskem obračunu za rjavo pasmo.

Snp Name	Chr	Position	Snp Index	Current Freq	Snp Effect	Base Freq	Snp W	Rang	Prang	Sum Up	Sum Down	RS*
UA-IFASA-4369	1	141531071	3065	0.18300	0.0005799970	0.23790	0.0005799970	31125	72.53216	94.81444	5.18466	rs29026456
Hapmap57645-rs29027916	1	150363389	3291	0.55580	0.0000741020	0.59330	0.0000741020	41346	96.35067	99.91035	0.08954	rs29027916
Hapmap52330-rs29021130	1	137391425	2977	0.60910	-0.0036597880	0.62370	0.0036597880	2969	6.91881	22.64592	77.34839	rs29021130
Hapmap53238-rs29021199	1	81516088	1722	0.21100	0.0004007040	0.22730	0.0004007040	34558	80.53225	97.42963	2.56975	rs29021199
Hapmap59750-rs29024375	1	3601437	93	0.59020	-0.0007320980	0.63580	0.0007320980	28348	66.06078	91.99314	8.00572	rs29024375
Hapmap60655-rs29025422	1	72052010	1530	0.47320	0.0035694140	0.40280	0.0035694140	3230	7.52703	24.11053	75.88393	rs29025422
Hapmap40403-BTA-15429	1	66230091	1403	0.25920	-0.0011942540	0.32250	0.0011942540	20821	48.52023	80.81509	19.18305	rs41575648
Hapmap39970-BTA-117984	1	38863022	789	0.54750	-0.0002429750	0.57560	0.0002429750	37770	88.01734	99.02912	0.97050	rs41571631
BTA-45195-no-rs	1	100297745	2139	0.56360	0.0036499690	0.56920	0.0036499690	2996	6.98173	22.79920	77.19513	rs41585816
UA-IFASA-9174	1	64592861	1363	0.37010	0.0005098630	0.40400	0.0005098630	32487	75.70610	95.96561	4.03360	rs41593713
Hapmap50536-BTA-99808	1	125641702	2687	0.12130	0.0003340510	0.20290	0.0003340510	35890	83.63628	98.18852	1.81096	rs41596878
BTA-95639-no-rs	1	76709967	1620	0.24650	-0.0028136490	0.25290	0.0028136490	6147	14.32466	38.42631	61.56932	rs41598314
BTA-51653-no-rs	1	102538612	2187	0.54540	-0.0001886650	0.50880	0.0001886650	38940	90.74385	99.42015	0.57956	rs41639575
Hapmap49149-BTA-39529	1	81271586	1714	0.24350	0.0009691640	0.26050	0.0009691640	24342	56.72539	86.71826	13.28024	rs41640542
Hapmap42913-BTA-33619	1	4052161	104	0.43600	0.0009536070	0.48180	0.0009536070	24596	57.31730	87.09748	12.90103	rs41633082

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Opombe
* RS številke za SNP_NAME smo pridobili na spletni strani http://bioinformatics.tecnoparco.org/SNPchimp/index.php/download/download-cow-data na dan 23.7.2018. V tem času so se lahko stvari tudi spremenile.

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Avtorji: Barbara Luštrek, Miran Štepec, Jurij Krsnik, Klemen Potočnik